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View Structure Prediction Details

Protein: MAK11
Organism: Saccharomyces cerevisiae
Length: 468 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MAK11.

Description E-value Query
Range
Subject
Range
gi|17225206 - gi|17225206|gb|AAL37299.1|AF323583_1 beta transducin-like protein HET-E2C*4 [Podospora anserina]
0.0 [2..468] [849..1240]
YY46_NOSS1 - Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=...
gi|25530855 - pir||AC2239 WD-40 repeat protein [imported] - Nostoc sp. (strain PCC 7120)
0.0 [1..468] [1039..1473]

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Predicted Domain #1
Region A:
Residues: [1-104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLNTTYTVF IFFLLRIIKF KIKAENFLEH EKLKTHGTSS RKDPKGQVKN SCRKMSAIGD  60
   61 KNQFRIIVGS YEHNILCLSL DIPNQKENDA AKTPHFMPIF HFQA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 100.512579
Match: 1gg2B_
Description: beta1-subunit of the signal-transducing G protein heterotrimer
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [105-468]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HSLSIKCLAV SRRYLVSGSN DEHIRIYDLQ KRKELGTLLS HQGSITALQF SHPASSSEDA  60
   61 AVSKGSKNSK WLLSASEDHK IMVWRVKDWE TVGTLKGHTA RVNDVDIHPT NRIAISVSDD 120
  121 HSIRLWNLMT LRNAAVLKLR KYNTNGTCVR WLGAKGDYFA VGLRDRVLIY ETGSAKVFKE 180
  181 IVFQRKTLMH IETHILPFDN KEYLSVGISD GNVHFYPCEE LFEKVEENEK QEDDDDKEDI 240
  241 SPAFSLLGHT NRIKDFKFYT NEFGTYLVTI GSDGKIVVWD MSTKEQVAVY DCGERLNCLT 300
  301 LCDESIEKYN TMKKRDAETA DIGDQSEVES DTEELKKIMF GEKKKLNKKK RKQLKKSKVS 360
  361 VELE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 122.035458
Match: 1erjA_
Description: Tup1, C-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle