| Protein: | OPT1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 799 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OPT1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..799] | [1..799] |
|
|
0.0 | [28..798] | [10..785] |
|
|
0.0 | [28..789] | [10..775] |
|
|
0.0 | [22..773] | [8..744] |
|
|
0.0 | [29..798] | [62..835] |
|
|
0.0 | [43..798] | [17..783] |
|
Region A: Residues: [1-799] |
1 11 21 31 41 51
| | | | | |
1 MSTIYRESDS LESEPSPTPT TIPIQINMEE EKKDAFVKNI DEDVNNLTAT TDEEDRDPES 60
61 QKFDRHSIQE EGLVWKGDPT YLPNSPYPEV RSAVSIEDDP TIRLNHWRTW FLTTVFVVVF 120
121 AGVNQFFSLR YPSLEINFLV AQVVCYPIGR ILALLPDWKC SKVPFFDLNP GPFTKKEHAV 180
181 VTIAVALTSS TAYAMYILNA QGSFYNMKLN VGYQFLLVWT SQMIGYGAAG LTRRWVVNPA 240
241 SSIWPQTLIS VSLFDSLHSR KVEKTVANGW TMPRYRFFLI VLIGSFIWYW VPGFLFTGLS 300
301 YFNVILWGSK TRHNFIANTI FGTQSGLGAL PITFDYTQVS QAMSGSVFAT PFYVSANTYA 360
361 SVLIFFVIVL PCLYFTNTWY AKYMPVISGS TYDNTQNKYN VTKILNEDYS INLEKYKEYS 420
421 PVFVPFSYLL SYALNFAAVI AVFVHCILYH GKDIVAKFKD RKNGGTDIHM RIYSKNYKDC 480
481 PDWWYLLLQI VMIGLGFVAV CCFDTKFPAW AFVIAILISL VNFIPQGILE AMTNQHVGLN 540
541 IITELICGYM LPLRPMANLL FKLYGFIVMR QGLNLSRDLK LAMYMKVSPR LIFAVQIYAT 600
601 IISGMVNVGV QEWMMHNIDG LCTTDQPNGF TCANGRTVFN ASIIWSLPKY LFSSGRIYNP 660
661 LMWFFLIGLL FPLAVYAVQW KFPKFKFAKH IHTPVFFTGP GNIPPSTPYN YSLFFAMSFC 720
721 LNLIRKRWRA WFNKYNFVMG AGVEAGVAIS VVIIFLCVQY PGGKLSWWGN NVWKRTYDND 780
781 YKKFYTLKKG ETFGYDKWW
|
| Detection Method: |  |
| Confidence: | 1000.0 |
| Match: | PF03169 |
| Description: | OPT oligopeptide transporter protein |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| transferase activity, transferring phosphorus-containing groups | 2.01281538416671 | bayes_pls_golite062009 |
| binding | 1.94407817286887 | bayes_pls_golite062009 |
| transferase activity | 1.60649038965008 | bayes_pls_golite062009 |
| DNA-directed RNA polymerase activity | 1.52156836827301 | bayes_pls_golite062009 |
| RNA polymerase activity | 1.52156836827301 | bayes_pls_golite062009 |
| catalytic activity | 0.853948963582441 | bayes_pls_golite062009 |
| nucleic acid binding | 0.703245359585675 | bayes_pls_golite062009 |
| DNA binding | 0.542083591442061 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.405555358891152 | bayes_pls_golite062009 |
|
Region A: Residues: [174-327] |
1 11 21 31 41 51
| | | | | |
1 TKKEHAVVTI AVALTSSTAY AMYILNAQGS FYNMKLNVGY QFLLVWTSQM IGYGAAGLTR 60
61 RWVVNPASSI WPQTLISVSL FDSLHSRKVE KTVANGWTMP RYRFFLIVLI GSFIWYWVPG 120
121 FLFTGLSYFN VILWGSKTRH NFIANTIFGT QSGL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [328-419] |
1 11 21 31 41 51
| | | | | |
1 GALPITFDYT QVSQAMSGSV FATPFYVSAN TYASVLIFFV IVLPCLYFTN TWYAKYMPVI 60
61 SGSTYDNTQN KYNVTKILNE DYSINLEKYK EY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [420-495] |
1 11 21 31 41 51
| | | | | |
1 SPVFVPFSYL LSYALNFAAV IAVFVHCILY HGKDIVAKFK DRKNGGTDIH MRIYSKNYKD 60
61 CPDWWYLLLQ IVMIGL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [496-617] |
1 11 21 31 41 51
| | | | | |
1 GFVAVCCFDT KFPAWAFVIA ILISLVNFIP QGILEAMTNQ HVGLNIITEL ICGYMLPLRP 60
61 MANLLFKLYG FIVMRQGLNL SRDLKLAMYM KVSPRLIFAV QIYATIISGM VNVGVQEWMM 120
121 HN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [618-799] |
1 11 21 31 41 51
| | | | | |
1 IDGLCTTDQP NGFTCANGRT VFNASIIWSL PKYLFSSGRI YNPLMWFFLI GLLFPLAVYA 60
61 VQWKFPKFKF AKHIHTPVFF TGPGNIPPST PYNYSLFFAM SFCLNLIRKR WRAWFNKYNF 120
121 VMGAGVEAGV AISVVIIFLC VQYPGGKLSW WGNNVWKRTY DNDYKKFYTL KKGETFGYDK 180
181 WW
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
