| Protein: | PRP21 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 280 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PRP21.
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-83 | [1..280] | [1..280] |
|
|
7.0E-68 | [4..255] | [30..304] |
|
|
1.0E-66 | [4..271] | [1055..1358] |
|
|
1.0E-66 | [4..234] | [36..299] |
|
|
2.0E-66 | [4..234] | [45..313] |
|
|
6.0E-66 | [4..235] | [20..282] |
|
|
9.0E-63 | [14..280] | [8..326] |
|
Region A: Residues: [1-75] |
1 11 21 31 41 51
| | | | | |
1 MEPEDTQLKE DIKTTVNYIK QHGVEFENKL LEDERFSFIK KDDPLHEYYT KLMNEPTDTV 60
61 SGEDNDRKSE REIAR
|
| Detection Method: |  |
| Confidence: | 13.920819 |
| Match: | PF01805 |
| Description: | Surp module |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [76-208] |
1 11 21 31 41 51
| | | | | |
1 PPDFLFSQYD TGISRRDMEV IKLTARYYAK DKSIVEQMIS KDGEARLNFM NSSHPLHKTF 60
61 TDFVAQYKRV YSFTGQEIKK SKRTILDNCF ERTQYWEFEK DKDREHDKLV ELCKIQFAAI 120
121 PWDKFTQVAK FSI
|
| Detection Method: | |
| Confidence: | 14.468521 |
| Match: | PF01805 |
| Description: | Surp module |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [209-280] |
1 11 21 31 41 51
| | | | | |
1 PEDTEIFEGS LDLEQMRLRR VQTGIKLFDS IKPTNEEEKI VSDQGKQKGG DSKGKKRKIR 60
61 AVGETRLKKS KK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.256 | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.295 | a.60.4 | DNA repair protein Rad51, N-terminal domain |
| View | Download | 0.240 | a.70.1 | N-terminal domain of the delta subunit of the F1F0-ATP synthase |
| View | Download | 0.221 | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.234 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.216 | d.26.1 | FKBP-like |
| View | Download | 0.208 | a.35.1 | lambda repressor-like DNA-binding domains |
