| Protein: | SWE1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 819 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SWE1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..819] | [1..819] |
|
|
0.0 | [106..775] | [106..759] |
|
|
0.0 | [281..775] | [5..476] |
|
|
0.0 | [281..775] | [26..497] |
|
|
0.0 | [281..775] | [5..476] |
|
|
0.0 | [281..775] | [5..476] |
|
|
0.0 | [281..775] | [5..476] |
|
|
0.0 | [281..775] | [5..477] |
|
Region A: Residues: [1-400] |
1 11 21 31 41 51
| | | | | |
1 MSSLDEDEED FEMLDTENLQ FMGKKMFGKQ AGEDESDDFA IGGSTPTNKL KFYPYSNNKL 60
61 TRSTGTLNLS LSNTALSEAN SKFLGKIEEE EEEEEEGKDE ESVDSRIKRW SPFHENESVT 120
121 TPITKRSAEK TNSPISLKQW NQRWFPKNDA RTENTSSSSS YSVAKPNQSA FTSSGLVSKM 180
181 SMDTSLYPAK LRIPETPVKK SPLVEGRDHK HVHLSSSKNA SSSLSVSPLN FVEDNNLQED 240
241 LLFSDSPSSK ALPSIHVPTI DSSPLSEAKY HAHDRHNNQT NILSPTNSLV TNSSPQTLHS 300
301 NKFKKIKRAR NSVILKNREL TNSLQQFKDD LYGTDENFPP PIIISSHHST RKNPQPYQFR 360
361 GRYDNDTDEE ISTPTRRKSI IGATSQTHRE SRPLSLSSAI
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [401-499] |
1 11 21 31 41 51
| | | | | |
1 VTNTTSAETH SISSTDSSPL NSKRRLISSN KLSANPDSHL FEKFTNVHSI GKGQFSTVYQ 60
61 VTFAQTNKKY AIKAIKPNKY NSLKRILLEI KILNEVTNQ
|
|
Region B: Residues: [513-529] |
1 11 21 31 41 51
| | | | | |
1 YISSWKFQNS YYIMTEL
|
| Detection Method: | |
| Confidence: | 261.218487 |
| Match: | 1fotA_ |
| Description: | cAMP-dependent PK, catalytic subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [500-512] |
1 11 21 31 41 51
| | | | | |
1 ITMDQEGKEY IID
|
|
Region B: Residues: [530-748] |
1 11 21 31 41 51
| | | | | |
1 CENGNLDGFL QEQVIAKKKR LEDWRIWKII VELSLALRFI HDSCHIVHLD LKPANVMITF 60
61 EGNLKLGDFG MATHLPLEDK SFENEGDREY IAPEIISDCT YDYKADIFSL GLMIVEIAAN 120
121 VVLPDNGNAW HKLRSGDLSD AGRLSSTDIH SESLFSDITK VDTNDLFDFE RDNISGNSNN 180
181 AGTSTVHNNS NINNPNMNNG NDNNNVNTAA TKNRLILHK
|
| Detection Method: | |
| Confidence: | 261.218487 |
| Match: | 1fotA_ |
| Description: | cAMP-dependent PK, catalytic subunit |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [749-819] |
1 11 21 31 41 51
| | | | | |
1 SSKIPAWVPK FLIDGESLER IVRWMIEPNY ERRPTANQIL QTEECLYVEM TRNAGAIIQE 60
61 DDFGPKPKFF I
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
