| Protein: | SET2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 733 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SET2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..724] | [1..724] |
|
|
0.0 | [21..706] | [82..774] |
|
|
3.0E-92 | [39..439] | [965..1333] |
|
|
3.0E-68 | [4..336] | [916..1268] |
|
|
5.0E-66 | [31..325] | [1762..2057] |
|
Region A: Residues: [1-89] |
1 11 21 31 41 51
| | | | | |
1 MSKNQSVSAS EDEKEILNNN AEGHKPQRLF DQEPDLTEEA LTKFENLDDC IYANKRIGTF 60
61 KNNDFMECDC YEEFSDGVNH ACDEDSDCI
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [90-279] |
1 11 21 31 41 51
| | | | | |
1 NRLTLIECVN DLCSSCGNDC QNQRFQKKQY APIAIFKTKH KGYGVRAEQD IEANQFIYEY 60
61 KGEVIEEMEF RDRLIDYDQR HFKHFYFMML QNGEFIDATI KGSLARFCNH SCSPNAYVNK 120
121 WVVKDKLRMG IFAQRKILKG EEITFDYNVD RYGAQAQKCY CEEPNCIGFL GGKTQTDAAS 180
181 LLPQNIADAL
|
| Detection Method: | |
| Confidence: | 64.031517 |
| Match: | PF00856 |
| Description: | SET domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [280-733] |
1 11 21 31 41 51
| | | | | |
1 GVTVSMEKKW LKLKKLSGEP IIKNENENIN IEFLQSLEVQ PIDSPVDVTK IMSVLLQQDN 60
61 KIIASKLLKR LFTIDDDSLR HQAIKLHGYT CFSKMLKLFI TEQPQVDGKG NETEEDDIKF 120
121 IKGILDFLLE LPKTTRNGIE SSQIDNVVKT LPAKFPFLKP NCDELLEKWS KFETYKRITK 180
181 KDINVAASKM IDLRRVRLPP GWEIIHENGR PLYYNAEQKT KLHYPPSGSS KVFSSRSNTQ 240
241 VNSPSSSGIP KTPGALDSKK HKLSDEEYER KKQKRLEYER IALERAKQEE LESLKQKLKL 300
301 ENERKSVLED IIAEFNKQKE LQKEESKKLV EAKEAKRLKR KTVSQSQRLE HNWNKFFASF 360
361 VPNLIKKNPQ SKQFDHENIK QCAKDIVKIL TTKELKKDSS RAPPDDLTKG KRHKVKEFIN 420
421 SYMDKIILKK KQKKALGLSS ASTRMSSPPP STSS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [608-733] |
1 11 21 31 41 51
| | | | | |
1 LVEAKEAKRL KRKTVSQSQR LEHNWNKFFA SFVPNLIKKN PQSKQFDHEN IKQCAKDIVK 60
61 ILTTKELKKD SSRAPPDDLT KGKRHKVKEF INSYMDKIIL KKKQKKALGL SSASTRMSSP 120
121 PPSTSS
|
| Detection Method: | |
| Confidence: | 36.30103 |
| Match: | 2c5zA |
| Description: | Structure and CTD binding of the Set2 SRI domain |
Matching Structure (courtesy of the PDB): |
|
