| Protein: | UTP18 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 594 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UTP18.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [168..590] | [847..1247] |
|
|
0.0 | [98..593] | [1020..1483] |
|
Region A: Residues: [1-90] |
1 11 21 31 41 51
| | | | | |
1 MTMATTAMNV SVPPPDEEEQ LLAKFVFGDT TDLQENLAKF NADFIFNEQE MDVEDQEDEG 60
61 SESDNSEEDE AQNGELDHVN NDQLFFVDDG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [91-231] |
1 11 21 31 41 51
| | | | | |
1 GNEDSQDKNE DTMDVDDEDD SSSDDYSEDS EEAAWIDSDD EKIKVPILVT NKTKKLRTSY 60
61 NESKINGVHY INRLRSQFEK IYPRPKWVDD ESDSELDDEE DDEEEGSNNV INGDINALTK 120
121 ILSTTYNYKD TLSNSKLLPP K
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [232-594] |
1 11 21 31 41 51
| | | | | |
1 KLDIVRLKDA NASHPSHSAI QSLSFHPSKP LLLTGGYDKT LRIYHIDGKT NHLVTSLHLV 60
61 GSPIQTCTFY TSLSNQNQQN IFTAGRRRYM HSWDLSLENL THSQTAKIEK FSRLYGHEST 120
121 QRSFENFKVA HLQNSQTNSV HGIVLLQGNN GWINILHSTS GLWLMGCKIE GVITDFCIDY 180
181 QPISRGKFRT ILIAVNAYGE VWEFDLNKNG HVIRRWKDQG GVGITKIQVG GGTTTTCPAL 240
241 QISKIKQNRW LAVGSESGFV NLYDRNNAMT SSTPTPVAAL DQLTTTISNL QFSPDGQILC 300
301 MASRAVKDAL RLVHLPSCSV FSNWPTSGTP LGKVTSVAFS PSGGLLAVGN EQGKVRLWKL 360
361 NHY
|
| Detection Method: | |
| Confidence: | 73.0 |
| Match: | 1gg2B_ |
| Description: | beta1-subunit of the signal-transducing G protein heterotrimer |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| snoRNA binding | 3.51833501249106 | bayes_pls_golite062009 |
| 3.41022148055944 | bayes_pls_golite062009 | |
| RNA binding | 3.0829625416797 | bayes_pls_golite062009 |
| binding | 2.22722319261713 | bayes_pls_golite062009 |
| transcription regulator activity | 1.25687092973217 | bayes_pls_golite062009 |
| nucleic acid binding | 1.20712373307552 | bayes_pls_golite062009 |
| structural molecule activity | 1.20572493724069 | bayes_pls_golite062009 |
| protein binding | 1.11897341394404 | bayes_pls_golite062009 |
| DNA binding | 0.711274653406079 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.523052412917759 | bayes_pls_golite062009 |
| ligase activity | 0.280267687917718 | bayes_pls_golite062009 |
| transcription factor activity | 0.243992994917491 | bayes_pls_golite062009 |
| mRNA binding | 0.0519838181830878 | bayes_pls_golite062009 |
