| Protein: | UBP7 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1071 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBP7.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1071] | [1..1071] |
|
|
0.0 | [309..950] | [151..778] |
|
|
4.0E-84 | [438..942] | [554..1048] |
|
|
3.0E-78 | [600..957] | [37..370] |
|
Region A: Residues: [1-222] |
1 11 21 31 41 51
| | | | | |
1 MLDDDKGTAM HPHITPFTPE YSNELLRRVQ DLYHEDIKHY YPQLKLEKLL DLLEHTEYLF 60
61 ELYLDSIHHD RPNDALTAFI IGCYYVFLII PQSLQFQTRN KSYSIYTDLK KMYENEMNMT 120
121 NVVLMVKKEI GVVLDESVKH GAGIEHRITK KRAFSVPADD LSGQVASLSL DTAAPQDHGL 180
181 KGTFTEDDAE QSSPVWTAPN LEPNDQLKLA LLPEVIPTPA FR
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
| Term | Confidence | Notes |
| catalytic activity | 0.660280721417663 | bayes_pls_golite062009 |
| protein binding | 0.649203212147117 | bayes_pls_golite062009 |
| hydrolase activity | 0.561937636673345 | bayes_pls_golite062009 |
| binding | 0.524618154422454 | bayes_pls_golite062009 |
| phosphoprotein phosphatase activity | 0.514129714366787 | bayes_pls_golite062009 |
| transferase activity | 0.24413644201982 | bayes_pls_golite062009 |
| phosphatase activity | 0.0126182055752568 | bayes_pls_golite062009 |
|
Region A: Residues: [223-299] |
1 11 21 31 41 51
| | | | | |
1 EPERKTSVPV RPSVLLEDVP SIYHEDDTSF ASLNPPFREI TADRSVTHRK DSYHSVYMVD 60
61 SGNLKEDNDD LFNVEND
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.396 | b.55.1 | PH domain-like |
| View | Download | 0.250 | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.223 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.371 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
|
Region A: Residues: [300-478] |
1 11 21 31 41 51
| | | | | |
1 GFIQSLDILQ KQSIITAPEL FSILSNRVER EKVLLIDLRI PQRSAINHIV APNLVNVDPN 60
61 LLWDKQTNTP IYKDDILEHL LKENENFINR NKFDYIVYYT DVKTFMTINF DYAFIFFYLM 120
121 LTSQKTPLTT VPTTLLGGYE KWKKTLHSYA QEYHISIEDY LYRPYSQKAR LQQEQQQQQ
|
| Detection Method: | |
| Confidence: | 17.29243 |
| Match: | PF00581 |
| Description: | Rhodanese-like domain |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [479-553] |
1 11 21 31 41 51
| | | | | |
1 QQPDSQDSFS AKESSTKVPE PPSWKPPDLP IRLRKRPPPP PPVSMPTTPE IPPPLPPKIM 60
61 VHSQVSSISR KPPIP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [554-648] |
1 11 21 31 41 51
| | | | | |
1 AKQHVKKEQL NSNEIIQRKR QHQHQHYDQQ ILQPQRAYNI PTIERSPNVY VSLSITGLRN 60
61 LGNTCYINSM IQCLFAAKTF RTLFISSKYK SYLQP
|
| Detection Method: | |
| Confidence: | 14.236572 |
| Match: | PF00442 |
| Description: | No description for PF00442 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [649-981] |
1 11 21 31 41 51
| | | | | |
1 IRSNGSHYSP KLSNSLSMLF NKMYLNGGCS VVPTGFLKVI NQLRPDLKIP DDQQDTQEFL 60
61 MILLDRLHDE LSDQQHVAND YPNLLLYNAD ALKVSNNEYK HWFDKNVIGN GISPIDDIFQ 120
121 GQMENSLQCK RCGYTTFNYS TFYVLSLAIP RRSMKLSKLG RSTEKRVKLE DCINMFTSDE 180
181 VLSGENAWDC PRCGPTASVS TSVSALENEP SIVKSKKKKS RFFTLHTGTK RRHLDFFGDG 240
241 ITEGHNSNNN NTTIFERERS RSPFRMLGGS GKRSSSSTPF STGGNDSNNS SDYKNKKLTT 300
301 VKTINFVTLP KILVIHLSRF YYDLTKKNNT VVT
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [982-1071] |
1 11 21 31 41 51
| | | | | |
1 YPLILNIILK NNDTMKYKLF GVVNHTGTLI SGHYTSLVNK DLEHNVNIGR SKWYYFDDEV 60
61 VKADRKHGSD KNLKISSSDV YVLFYERVYD
|
| Detection Method: | |
| Confidence: | 22.200659 |
| Match: | PF00443 |
| Description: | Ubiquitin carboxyl-terminal hydrolase |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
