| Protein: | DPH1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 425 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DPH1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..425] | [1..425] |
|
|
0.0 | [8..415] | [6..413] |
|
|
0.0 | [43..415] | [25..392] |
|
|
0.0 | [46..415] | [2..369] |
|
|
0.0 | [39..415] | [29..403] |
|
|
0.0 | [39..402] | [26..391] |
|
|
0.0 | [59..416] | [70..409] |
|
Region A: Residues: [1-162] |
1 11 21 31 41 51
| | | | | |
1 MSGSTESKKQ PRRRFIGRKS GNSNNDKLTT VAENGNEIIH KQKSRIALGR SVNHVPEDIL 60
61 NDKELNEAIK LLPSNYNFEI HKTVWNIRKY NAKRIALQMP EGLLIYSLII SDILEQFCGV 120
121 ETLVMGDVSY GACCIDDFTA RALDCDFIVH YAHSCLVPID VT
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [163-226] |
1 11 21 31 41 51
| | | | | |
1 KIKVLYVFVT INIQEDHIIK TLQKNFPKGS RIATFGTIQF NPAVHSVRDK LLNDEEHMLY 60
61 IIPP
|
|
Region B: Residues: [282-425] |
1 11 21 31 41 51
| | | | | |
1 RKFTREGYDQ KQLVEVRAEA IEVARKGKVF GLILGALGRQ GNLNTVKNLE KNLIAAGKTV 60
61 VKIILSEVFP QKLAMFDQID VFVQVACPRL SIDWGYAFNK PLLTPYEASV LLKKDVMFSE 120
121 KYYPMDYYEA KGYGRGETPK HAIE
|
| Detection Method: | |
| Confidence: | 7.04 |
| Match: | 1jzxK |
| Description: | 50S subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [227-281] |
1 11 21 31 41 51
| | | | | |
1 QIKPLSRGEV LGCTSERLDK EQYDAMVFIG DGRFHLESAM IHNPEIPAFK YDPYN
|
| Detection Method: | |
| Confidence: | 7.04 |
| Match: | 1jzxK |
| Description: | 50S subunit |
| Matching Structure (courtesy of the PDB): |
|
