| Protein: | BZZ1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 633 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BZZ1.
| Description | E-value | Query Range |
Subject Range |
|
|
368.0 | [0..1] | [633..1] |
|
|
309.0 | [0..2] | [529..2099] |
|
|
298.0 | [0..7] | [632..8] |
|
|
282.0 | [0..2] | [529..1046] |
|
|
268.0 | [0..4] | [632..2] |
|
|
266.0 | [0..18] | [629..567] |
|
|
264.0 | [0..33] | [629..244] |
|
|
260.0 | [0..2] | [484..1102] |
|
Region A: Residues: [1-420] |
1 11 21 31 41 51
| | | | | |
1 MSADLSIGNE IKDSFKETHK WVQNNLKWLK DIEQFYRERA KLEKDYSERL SRLSAEYFNK 60
61 KSSTSVPISV GDTPTTTPGS IEAAGVVAWN EILSQTDMIS KDHDQLSTDF ENHVANQLSG 120
121 LFTKLDMTLS KINGFNNDMV NKKDNIYHEL EKAKKDYDEA CSTMEMARNR YTKASNDRNK 180
181 KKLDEKEMEM NKCKNEYLIK INQANRTKDK YYFQDVPEVL DLLQDVNEAK TLFLNDLWLK 240
241 AASVENDLGA NVSKRLQAAN SVVKQNKPSL NTAIFIKHNL KNWKEPQDFV YKPSPVWHDD 300
301 EKFAVPSSLE VEDLRIKLAK AENDYNSLQD KTQNELSKLS TLNKIKHEMK TNEDNINATK 360
361 FYDTLKEYLN VVSPFTSHET LKLQAEVQIE SIQNNVPEEY DLSTDNIDLS KTKKKSGIFS 420
421
|
| Detection Method: |  |
| Confidence: | 12.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [421-495] |
1 11 21 31 41 51
| | | | | |
1 KFKHNILNVD SKPSSGGSTG NGNGGPLHIT SLFNTSRRTR LGSAPNNAGE DSDNNSIRTT 60
61 STNNTKKTTQ NSSDD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.265 | c.47.1 | Thioredoxin-like |
| View | Download | 0.205 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.204 | a.221.1 | Description not found. |
| View | Download | 0.201 | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.201 | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
|
Region A: Residues: [496-565] |
1 11 21 31 41 51
| | | | | |
1 GKNKVLYAYV QKDDDEITIT PGDKISLVAR DTGSGWTKIN NDTTGETGLV PTTYIRISSA 60
61 ATVKANDRGP
|
| Detection Method: | |
| Confidence: | 3.154902 |
| Match: | 1pnjA |
| Description: | SOLUTION STRUCTURE AND LIGAND-BINDING SITE OF THE SH3 DOMAIN OF THE P85ALPHA SUBUNIT OF PHOSPHATIDYLINOSITOL 3-KINASE |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [566-633] |
1 11 21 31 41 51
| | | | | |
1 APEVPPPRRS TLPVRTMEAI YAYEAQGDDE ISIDPGDIIT VIRGDDGSGW TYGECDGLKG 60
61 LFPTSYCK
|
| Detection Method: | |
| Confidence: | 36.917458 |
| Match: | 1gcqA |
| Description: | Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains |
Matching Structure (courtesy of the PDB): |
|
