YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YHL012W
Organism: Saccharomyces cerevisiae
Length: 493 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YHL012W.

Description E-value Query
Range
Subject
Range
SPCC1322.04 - UTP-glucose-1-phosphate uridylyltransferase
UGPA1_SCHPO - Probable UTP--glucose-1-phosphate uridylyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATC...
0.0 [5..489] [10..505]
gi|7415873 - gi|7415873|dbj|BAA93572.1| Ugp1 [Candida glabrata]
0.0 [1..489] [1..501]
UGPA_MUSAC - UTP--glucose-1-phosphate uridylyltransferase OS=Musa acuminata GN=UGPA PE=2 SV=1
0.0 [24..483] [1..463]
gi|190409789 - gi|190409789|gb|EDV13054.1| UTP-glucose-1-phosphate uridylyltransferase [Saccharomyces cerevisiae RM...
gi|151941509 - gi|151941509|gb|EDN59872.1| uridinephosphoglucose pyrophosphorylase [Saccharomyces cerevisiae YJM789...
UGPA1_YEAST - UTP--glucose-1-phosphate uridylyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c...
gi|207343473 - gi|207343473|gb|EDZ70924.1| YKL035Wp-like protein [Saccharomyces cerevisiae AWRI1631]
UGP1 - UDP-glucose pyrophosphorylase (UGPase), catalyses the reversible formation of UDP-Glc from glucose 1...
0.0 [1..489] [1..498]
gi|7417426 - gi|7417426|gb|AAF62555.1|AF249880_1 UDP-glucose pyrophosphorylase [Oryza sativa subsp. indica]
0.0 [24..483] [1..463]
gi|115480571, gi... - gi|222642056|gb|EEE70188.1| hypothetical protein OsJ_30269 [Oryza sativa Japonica Group], gi|2157673...
0.0 [22..483] [2..465]
UGPA1_ARATH - UTP--glucose-1-phosphate uridylyltransferase 1 OS=Arabidopsis thaliana GN=UGP1 PE=2 SV=1
0.0 [25..483] [5..466]
UGPA_HORVU - UTP--glucose-1-phosphate uridylyltransferase OS=Hordeum vulgare PE=2 SV=1
gi|1212996 - gi|1212996|emb|CAA62689.1| UDP-glucose pyrophosphorylase [Hordeum vulgare subsp. vulgare]
0.0 [20..483] [3..469]
gi|17026394 - gi|17026394|gb|AAL33919.1| UDP-glucose pyrophosphorylase [Amorpha fruticosa]
0.0 [21..483] [2..467]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
0.0 [20..483] [3..473]

Back

Predicted Domain #1
Region A:
Residues: [1-61]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVFSGVNKI EFEGTFEGIG KDVVMSQMIR ALQKHFPSIR DKNYEFSLFL HIFQRYVLEN  60
   61 T

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [62-493]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SITHDLVCDK IRLPIIDEVV ELDDIKNYGL LEGKLLSKLA ILKLTGKANP IIGKESPLFE  60
   61 VKNGMSSLDV IVRQTQNLNV RYNSDVPLIF MTSLETESQV SNFLEEHYSS SKVRWKTVVQ 120
  121 SSFPQIDKDR LLPIDLQINS HENDFWYPCG TGNLTDTLYF SGELDKLIAQ GKEILFVSNV 180
  181 DNLGATGDLN ILNFIINEKI EYLVEVVERT ANVSNTGVLA TYKGKLRSVY YNCLSNESAS 240
  241 TCRIVNTNNI WIDLKKLKVL IESNSLNLPI HSSESKITHK NEEIECLQFK TQLVDCIAFF 300
  301 PNSRVLKVSR DRFLPLRTCK DLFLLKSTLY DLDSNGTFNL YPLKFGLLPS IDLGDEFATY 360
  361 ETFKIGVPDI PNILELEHLT VMGNVFFGRN ITLKGTVIII CDENDVITVP DGSILENVTI 420
  421 WHKSQLEDMN GY

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 11.57
Match: 1hv9A
Description: N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain; N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle