| Protein: | PXR1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 271 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PXR1.
| Description | E-value | Query Range |
Subject Range |
|
|
214.0 | [0..1] | [271..1] |
|
|
173.0 | [0..1] | [270..1] |
|
|
165.0 | [0..3] | [231..4] |
|
|
161.0 | [0..3] | [172..4] |
|
|
155.0 | [0..20] | [223..307] |
|
|
151.0 | [0..3] | [171..4] |
|
|
150.0 | [0..3] | [227..4] |
|
|
148.0 | [0..22] | [216..197] |
|
|
148.0 | [0..3] | [173..4] |
|
Region A: Residues: [1-136] |
1 11 21 31 41 51
| | | | | |
1 MGLAATRTKQ RFGLDPRNTA WSNDTSRFGH QFLEKFGWKP GMGLGLSPMN SNTSHIKVSI 60
61 KDDNVGLGAK LKRKDKKDEF DNGECAGLDV FQRILGRLNG KESKISEELD TQRKQKIIDG 120
121 KWGIHFVKGE VLASTW
|
| Detection Method: |  |
| Confidence: | 13.346787 |
| Match: | PF01585 |
| Description: | G-patch domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [137-271] |
1 11 21 31 41 51
| | | | | |
1 DPKTHKLRNY SNAKKRKREG DDSEDEDDDD KEDKDSDKKK HKKHKKHKKD KKKDKKDKKE 60
61 HKKHKKEEKR LKKEKRAEKT KETKKTSKLK SSESASNIPD AVNTRLSVRS KWIKQKRAAL 120
121 MDSKALNEIF MITND
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
