Protein: | PXR1 |
Organism: | Saccharomyces cerevisiae |
Length: | 271 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PXR1.
Description | E-value | Query Range |
Subject Range |
|
214.0 | [0..1] | [271..1] |
|
173.0 | [0..1] | [270..1] |
|
165.0 | [0..3] | [231..4] |
|
161.0 | [0..3] | [172..4] |
|
155.0 | [0..20] | [223..307] |
|
151.0 | [0..3] | [171..4] |
|
150.0 | [0..3] | [227..4] |
|
148.0 | [0..22] | [216..197] |
|
148.0 | [0..3] | [173..4] |
Region A: Residues: [1-136] |
1 11 21 31 41 51 | | | | | | 1 MGLAATRTKQ RFGLDPRNTA WSNDTSRFGH QFLEKFGWKP GMGLGLSPMN SNTSHIKVSI 60 61 KDDNVGLGAK LKRKDKKDEF DNGECAGLDV FQRILGRLNG KESKISEELD TQRKQKIIDG 120 121 KWGIHFVKGE VLASTW |
Detection Method: | |
Confidence: | 13.346787 |
Match: | PF01585 |
Description: | G-patch domain |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.536 | N/A | N/A | a.40.1 | Calponin-homology domain, CH-domain |
View | Download | 0.531 | N/A | N/A | a.229.1 | Description not found. |
View | Download | 0.525 | N/A | N/A | c.57.1 | Molybdenum cofactor biosynthesis proteins |
View | Download | 0.447 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
View | Download | 0.447 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
View | Download | 0.369 | N/A | N/A | c.23.1 | CheY-like |
View | Download | 0.322 | N/A | N/A | a.61.1 | Retroviral matrix proteins |
View | Download | 0.301 | N/A | N/A | a.118.9 | ENTH/VHS domain |
Region A: Residues: [137-271] |
1 11 21 31 41 51 | | | | | | 1 DPKTHKLRNY SNAKKRKREG DDSEDEDDDD KEDKDSDKKK HKKHKKHKKD KKKDKKDKKE 60 61 HKKHKKEEKR LKKEKRAEKT KETKKTSKLK SSESASNIPD AVNTRLSVRS KWIKQKRAAL 120 121 MDSKALNEIF MITND |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.245 | a.74.1 | Cyclin-like |