| Protein: | SCW4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 386 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCW4.
| Description | E-value | Query Range |
Subject Range |
|
|
3.0E-87 | [112..385] | [13..332] |
|
|
9.0E-86 | [117..385] | [6..325] |
|
|
5.0E-85 | [116..386] | [5..327] |
|
|
1.0E-84 | [114..386] | [6..330] |
|
|
3.0E-84 | [110..386] | [11..338] |
|
|
4.0E-84 | [116..386] | [5..327] |
|
|
1.0E-83 | [1..386] | [1..389] |
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 MRLSNLIASA SLLSAATLAA PANHEHKDKR AVVTTTVQKQ TTIIVNGAAS TPVAALEENA 60
61 VVNSAPAAAT STTSSAASVA TAAASSSENN SQVSAA
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [97-193] |
1 11 21 31 41 51
| | | | | |
1 ASPASSSAAT STQSSSSSQA SSSSSSGEDV SSFASGVRGI TYTPYESSGA CKSASEVASD 60
61 LAQLTDFPVI RLYGTDCNQV ENVFKAKASN QKVFLGI
|
|
Region B: Residues: [208-225] |
1 11 21 31 41 51
| | | | | |
1 SAVESYGSWD DVTTVSIG
|
|
Region C: Residues: [255-261] |
1 11 21 31 41 51
| | | | | |
1 YTGPVVS
|
| Detection Method: | |
| Confidence: | 71.30103 |
| Match: | 1ghsA_ |
| Description: | Plant beta-glucanases |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrolase activity, acting on glycosyl bonds | 5.36248919165223 | bayes_pls_golite062009 |
| glucan 1,3-beta-glucosidase activity | 5.16200085143699 | bayes_pls_golite062009 |
| hydrolase activity, hydrolyzing O-glycosyl compounds | 4.11319792356479 | bayes_pls_golite062009 |
| glucosidase activity | 3.69195576225095 | bayes_pls_golite062009 |
| beta-glucosidase activity | 3.14931331494576 | bayes_pls_golite062009 |
| chitinase activity | 2.45357334610104 | bayes_pls_golite062009 |
| alpha-amylase activity | 2.09193270404736 | bayes_pls_golite062009 |
| amylase activity | 2.03484942782894 | bayes_pls_golite062009 |
| catalytic activity | 1.85569074294201 | bayes_pls_golite062009 |
| hexosaminidase activity | 1.26857012744249 | bayes_pls_golite062009 |
| hydrolase activity | 1.22608062881808 | bayes_pls_golite062009 |
| receptor binding | 0.709153600415243 | bayes_pls_golite062009 |
| binding | 0.589888593043114 | bayes_pls_golite062009 |
| carbohydrate binding | 0.45065632894721 | bayes_pls_golite062009 |
| signal transducer activity | 0.346648903090409 | bayes_pls_golite062009 |
| molecular transducer activity | 0.346648903090409 | bayes_pls_golite062009 |
| hyalurononglucosaminidase activity | 0.123700697143861 | bayes_pls_golite062009 |
| pattern binding | 0.113396113487931 | bayes_pls_golite062009 |
| polysaccharide binding | 0.10746671207581 | bayes_pls_golite062009 |
|
Region A: Residues: [194-207] |
1 11 21 31 41 51
| | | | | |
1 YYVDQIQDGV NTIK
|
|
Region B: Residues: [226-254] |
1 11 21 31 41 51
| | | | | |
1 NELVNGNQAT PSQVGQYIDS GRSALKAAG
|
|
Region C: Residues: [262-284] |
1 11 21 31 41 51
| | | | | |
1 VDTFIAVINN PELCDYSDYM AVN
|
|
Region D: Residues: [302-322] |
1 11 21 31 41 51
| | | | | |
1 LLEQIQRVWT ACDGKKNVVI T
|
| Detection Method: | |
| Confidence: | 71.30103 |
| Match: | 1ghsA_ |
| Description: | Plant beta-glucanases |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [285-301] |
1 11 21 31 41 51
| | | | | |
1 AHAYFDKNTV AQDSGKW
|
|
Region B: Residues: [323-386] |
1 11 21 31 41 51
| | | | | |
1 ESGWPSKGET YGVAVPSKEN QKDAVSAITS SCGADTFLFT AFNDYWKADG AYGVEKYWGI 60
61 LSNE
|
| Detection Method: | |
| Confidence: | 71.30103 |
| Match: | 1ghsA_ |
| Description: | Plant beta-glucanases |
| Matching Structure (courtesy of the PDB): |
|
