| Protein: | SCW4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 386 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCW4.
| Description | E-value | Query Range |
Subject Range |
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3.0E-87 | [112..385] | [13..332] |
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9.0E-86 | [117..385] | [6..325] |
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5.0E-85 | [116..386] | [5..327] |
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1.0E-84 | [114..386] | [6..330] |
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3.0E-84 | [110..386] | [11..338] |
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4.0E-84 | [116..386] | [5..327] |
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1.0E-83 | [1..386] | [1..389] |
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 MRLSNLIASA SLLSAATLAA PANHEHKDKR AVVTTTVQKQ TTIIVNGAAS TPVAALEENA 60
61 VVNSAPAAAT STTSSAASVA TAAASSSENN SQVSAA
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.620 | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.611 | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.550 | d.58.42 | N-utilization substance G protein NusG, N-terminal domain |
| View | Download | 0.503 | d.146.1 | Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain |
| View | Download | 0.439 | b.101.1 | Ribonuclease domain of colicin E3 |
| View | Download | 0.415 | d.141.1 | Ribosomal protein L6 |
| View | Download | 0.410 | b.121.3 | Nucleoplasmin-like core domain |
| View | Download | 0.392 | b.92.1 | Composite domain of metallo-dependent hydrolases |
| View | Download | 0.383 | d.102.1 | Regulatory factor Nef |
| View | Download | 0.379 | a.150.1 | Anti-sigma factor AsiA |
| View | Download | 0.353 | a.26.1 | 4-helical cytokines |
| View | Download | 0.341 | b.114.1 | N-utilization substance G protein NusG, insert domain |
| View | Download | 0.324 | d.93.1 | SH2 domain |
| View | Download | 0.307 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.295 | c.84.1 | Phosphoglucomutase, first 3 domains |
| View | Download | 0.282 | d.82.2 | Frataxin-like |
| View | Download | 0.281 | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.272 | b.34.9 | Tudor/PWWP/MBT |
| View | Download | 0.267 | c.23.12 | Formate/glycerate dehydrogenase catalytic domain-like |
| View | Download | 0.261 | d.141.1 | Ribosomal protein L6 |
| View | Download | 0.255 | d.222.1 | YbaB-like |
| View | Download | 0.240 | d.50.3 | PI-Pfui intein middle domain |
| View | Download | 0.207 | g.28.1 | Thyroglobulin type-1 domain |
|
Region A: Residues: [97-193] |
1 11 21 31 41 51
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1 ASPASSSAAT STQSSSSSQA SSSSSSGEDV SSFASGVRGI TYTPYESSGA CKSASEVASD 60
61 LAQLTDFPVI RLYGTDCNQV ENVFKAKASN QKVFLGI
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Region B: Residues: [208-225] |
1 11 21 31 41 51
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1 SAVESYGSWD DVTTVSIG
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Region C: Residues: [255-261] |
1 11 21 31 41 51
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1 YTGPVVS
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| Detection Method: | |
| Confidence: | 71.30103 |
| Match: | 1ghsA_ |
| Description: | Plant beta-glucanases |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrolase activity, acting on glycosyl bonds | 5.36248919165223 | bayes_pls_golite062009 |
| glucan 1,3-beta-glucosidase activity | 5.16200085143699 | bayes_pls_golite062009 |
| hydrolase activity, hydrolyzing O-glycosyl compounds | 4.11319792356479 | bayes_pls_golite062009 |
| glucosidase activity | 3.69195576225095 | bayes_pls_golite062009 |
| beta-glucosidase activity | 3.14931331494576 | bayes_pls_golite062009 |
| chitinase activity | 2.45357334610104 | bayes_pls_golite062009 |
| alpha-amylase activity | 2.09193270404736 | bayes_pls_golite062009 |
| amylase activity | 2.03484942782894 | bayes_pls_golite062009 |
| catalytic activity | 1.85569074294201 | bayes_pls_golite062009 |
| hexosaminidase activity | 1.26857012744249 | bayes_pls_golite062009 |
| hydrolase activity | 1.22608062881808 | bayes_pls_golite062009 |
| receptor binding | 0.709153600415243 | bayes_pls_golite062009 |
| binding | 0.589888593043114 | bayes_pls_golite062009 |
| carbohydrate binding | 0.45065632894721 | bayes_pls_golite062009 |
| signal transducer activity | 0.346648903090409 | bayes_pls_golite062009 |
| molecular transducer activity | 0.346648903090409 | bayes_pls_golite062009 |
| hyalurononglucosaminidase activity | 0.123700697143861 | bayes_pls_golite062009 |
| pattern binding | 0.113396113487931 | bayes_pls_golite062009 |
| polysaccharide binding | 0.10746671207581 | bayes_pls_golite062009 |
|
Region A: Residues: [194-207] |
1 11 21 31 41 51
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1 YYVDQIQDGV NTIK
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Region B: Residues: [226-254] |
1 11 21 31 41 51
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1 NELVNGNQAT PSQVGQYIDS GRSALKAAG
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Region C: Residues: [262-284] |
1 11 21 31 41 51
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1 VDTFIAVINN PELCDYSDYM AVN
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Region D: Residues: [302-322] |
1 11 21 31 41 51
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1 LLEQIQRVWT ACDGKKNVVI T
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| Detection Method: | |
| Confidence: | 71.30103 |
| Match: | 1ghsA_ |
| Description: | Plant beta-glucanases |
| Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [285-301] |
1 11 21 31 41 51
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1 AHAYFDKNTV AQDSGKW
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Region B: Residues: [323-386] |
1 11 21 31 41 51
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1 ESGWPSKGET YGVAVPSKEN QKDAVSAITS SCGADTFLFT AFNDYWKADG AYGVEKYWGI 60
61 LSNE
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| Detection Method: | |
| Confidence: | 71.30103 |
| Match: | 1ghsA_ |
| Description: | Plant beta-glucanases |
| Matching Structure (courtesy of the PDB): |
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