| Protein: | PEF1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 335 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PEF1.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-93 | [1..335] | [1..335] |
|
|
1.0E-62 | [100..298] | [307..522] |
|
|
2.0E-62 | [116..296] | [345..523] |
|
|
6.0E-62 | [115..296] | [373..552] |
|
|
7.0E-62 | [117..299] | [365..546] |
|
|
9.0E-62 | [115..296] | [373..552] |
|
Region A: Residues: [1-160] |
1 11 21 31 41 51
| | | | | |
1 MCAKKLKYAA GDDFVRYATP KEAMEETRRE FEKEKQRQQQ IKVTQAQTPN TRVHSAPIPL 60
61 QTQYNKNRAE NGHHSYGSPQ SYSPRHTKTP VDPRYNVIAQ KPAGRPIPPA PTHYNNLNTS 120
121 AQRIASSPPP LIHNQAVPAQ LLKKVAPASF DSREDVRDMQ
|
| Detection Method: |  |
| Confidence: | 106.519517 |
| Match: | 1juoA_ |
| Description: | Sorcin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [161-245] |
1 11 21 31 41 51
| | | | | |
1 VATQLFHNHD VKGKNRLTAE ELQNLLQNDD NSHFCISSVD ALINLFGASR FGTVNQAEFI 60
61 ALYKRVKSWR KVYVDNDING SLTIS
|
| Detection Method: | |
| Confidence: | 106.519517 |
| Match: | 1juoA_ |
| Description: | Sorcin |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [246-335] |
1 11 21 31 41 51
| | | | | |
1 VSEFHNSLQE LGYLIPFEVS EKTFDQYAEF INRNGTGKEL KFDKFVEALV WLMRLTKLFR 60
61 KFDTNQEGIA TIQYKDFIYA TLYLGRFLPH
|
| Detection Method: | |
| Confidence: | 179.68867 |
| Match: | 1hqvA_ |
| Description: | Apoptosis-linked protein alg-2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| calcium ion binding | 3.79609619542776 | bayes_pls_golite062009 |
| binding | 3.17556402087346 | bayes_pls_golite062009 |
| protein binding | 2.21291432166051 | bayes_pls_golite062009 |
| cation binding | 1.58747127156827 | bayes_pls_golite062009 |
| metal ion binding | 1.58747127156827 | bayes_pls_golite062009 |
| ion binding | 1.57990289083749 | bayes_pls_golite062009 |
| transcription regulator activity | 0.450279748770607 | bayes_pls_golite062009 |
| nucleic acid binding | 0.0981928858355918 | bayes_pls_golite062009 |
| DNA binding | 0.0960817636106102 | bayes_pls_golite062009 |
