Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YGR017W.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..297] | [1..297] |
|
|
6.0E-39 | [8..124] | [5..136] |
|
|
4.0E-37 | [1..111] | [1..95] |
|
|
8.0E-32 | [5..114] | [3..96] |
|
Region A: Residues: [1-152] |
1 11 21 31 41 51
| | | | | |
1 MSHQMAPWIP MFIQSCKNNT EPFVSFQFAT VDELTNKPRC RTVVFRDFLF HDKRTNVLTF 60
61 NTDMRSSKIT ESFITPNSNN SSDSKRCETP FFEACFYFPE TWEQYRFSGQ CFTISKQFKK 120
121 IPAEIVTKYD IFSPRFSETN DDSTDEEIDT PI
|
| Detection Method: |  |
| Confidence: | 13.85 |
| Match: | 1ci0A |
| Description: | Pyridoxine 5'-phoshate oxidase (PNP oxidase) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [153-297] |
1 11 21 31 41 51
| | | | | |
1 NDDDDDDKNN DADNNDINED NKLIESIEND EHHEDEDDYY PQPQEWEAEL LRQWSSLSRH 60
61 TKSLYRKPAP GQKLTSETSK QLDKLHRGVD GAKEDAGLEN FGIVCLCVDS VDFLNLKEGR 120
121 GGERWIFQKT DGKDEDLWEE QEVCP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.364 | a.1.1 | Globin-like |
| View | Download | 0.627 | a.24.3 | Cytochromes |
| View | Download | 0.425 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.353 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.322 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.297 | a.48.2 | Transferrin receptor ectodomain, C-terminal domain |
| View | Download | 0.295 | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.294 | d.38.1 | Thioesterase/thiol ester dehydrase-isomerase |
| View | Download | 0.257 | b.55.1 | PH domain-like |
| View | Download | 0.241 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.234 | a.1.1 | Globin-like |
| View | Download | 0.223 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.220 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.200 | a.18.1 | T4 endonuclease V |
| Term | Confidence | Notes |
| transcription regulator activity | 2.32760581622259 | bayes_pls_golite062009 |
| binding | 2.16870325397306 | bayes_pls_golite062009 |
| catalytic activity | 0.636519364005912 | bayes_pls_golite062009 |
| transcription factor binding | 0.397617773348741 | bayes_pls_golite062009 |
| protein binding | 0.0480378028458218 | bayes_pls_golite062009 |
