Protein: | MSB2 |
Organism: | Saccharomyces cerevisiae |
Length: | 1306 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MSB2.
Description | E-value | Query Range |
Subject Range |
|
419.0 | [0..1] | [1195..1157] |
|
410.0 | [0..13] | [1190..418] |
|
310.0 | [0..2] | [1197..1317] |
Region A: Residues: [1-81] |
1 11 21 31 41 51 | | | | | | 1 MQFPFACLLS TLVISGSLAR ASPFDFIFGN GTQQAQSQSE SQGQVSFTNE ASQDSSTTSL 60 61 VTAYSQGVHS HQSATIVSAT I |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [82-326] |
1 11 21 31 41 51 | | | | | | 1 SSLPSTWYDA SSTSQTSVSY ASQESDYAVN QNSWSASTNQ LPSTSTTSYY APTFSTSADF 60 61 AASSVNAASD VSTASVPIDT SANSIPFTTT SNIETTTSAP LTSDTPLIST STMSAADNVF 120 121 SSANPISASL TTTDSSESFD QTSTAGAIPV QSSADFSSSS EILVQSSADF SSPSSPTTTD 180 181 ISLSAAPLQT SESSSFTTAS AALPVSSTDV DGSSASPVVS MSAAGQIASS SSTDNPTMSE 240 241 TFSLT |
Detection Method: | |
Confidence: | 8.0 |
Match: | 2h6oA |
Description: | No description for 2h6oA was found. |
Region A: Residues: [327-454] |
1 11 21 31 41 51 | | | | | | 1 STEVDGSDVS STVSALLSAP FLQTSTSNSF SIVSPSVSFV PSQSSSDVAS SSTANVVSSS 60 61 FSDIPPQTST SGSVVSVAQS ASALAFQSST EVYGASASST MSSLLSTTSL QSTTLDSSSL 120 121 ASSSASSS |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [455-645] |
1 11 21 31 41 51 | | | | | | 1 DLTDYGVSST ASIPLLSASE QASTSSSFSV VSPSVSFVPS QSSSDVASTS APSVVSSSFS 60 61 YTSLQAGGSS MTNPSSSTIV YSSSTGSSEE SAASTASATL SGSSSTYMAG NLQSQPPSTS 120 121 SLLSESQATS TSAVLASSSV STTSPYTTAG GASTEASSLI SSTSAETSQV SYSQSTTALQ 180 181 TSSFASSSTT E |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [646-873] |
1 11 21 31 41 51 | | | | | | 1 GSETSSQGFS TSSVLVQMPS SISSEFSPSQ TTTQMNSASS SSQYTISSTG ILSQVSDTSV 60 61 SYTTSSSSVS QVSDTPVSYT TSSSSVSQVS DTPVSYTTSS SSVSQVSDTP VSYTTSSSSV 120 121 SQVSDTPVSY TTSSSSVSQV SDTSVPSTSS RSSVSQVSDT PVPSTSSRSS VSQTSSSLQP 180 181 TTTSSQRFTI STHGALSESS SVSQQASEIT SSINATASEY HSIQTTAA |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [874-1070] |
1 11 21 31 41 51 | | | | | | 1 TQSTTLSFTD ANSSSASAPL EVATSTPTPS SKASSLLLTP STSSLSQVAT NTNVQTSLTT 60 61 ESTTVLEPST TNSSSTFSLV TSSDNNWWIP TELITQAPEA ASTASSTVGG TQTMTLPHAI 120 121 AAATQVPEPE GYTLITIGFK KALNYEFVVS EPKSSAQIFG YLPEALNTPF KNVFTNITVL 180 181 QIVPLQDDSL NYLVSVA |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [1071-1223] |
1 11 21 31 41 51 | | | | | | 1 EVYFPTAEIE ELSNLITNSS SAFYTDGMGT AKSMAAMVDS SIPLTGLLHD SNSNSGGSSD 60 61 GSSSSNSNSG SSGSGSNSNS GVSSSSGNSY QDAGTLEYSS KSNSNVSTSS KSKKKIIGLV 120 121 IGVVVGGCLY ILFMIFAFKY IIRRRIQSQE IIK |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [1224-1306] |
1 11 21 31 41 51 | | | | | | 1 NPEISSISSS EFGGEKNYNN EKRMSVQESI TQSMRIQNWM DDSYYGHGLT NNDSTPTRHN 60 61 TSSSIPKISR PIASQNSLGW NEV |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.