| Protein: | COS12 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 380 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COS12.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [5..379] | [7..377] |
|
Region A: Residues: [1-59] |
1 11 21 31 41 51
| | | | | |
1 MDGAKFENTV AFLPSEIFDC YNSTLPKNVF RSFVTWSCYE KFNSLEFRTW LLMWLPLII
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [60-171] |
1 11 21 31 41 51
| | | | | |
1 AWKIRGKRHY LVIVTALMFE VLYFLWTYSY IFRERTLGKQ VSQFAKEIIT NTPGIDTEDW 60
61 ERVAVNFNSY LYENKLWNTE YFFFDGSSCQ EAFRKMLLEP FSLKKNDFAN AK
|
| Detection Method: | |
| Confidence: | 47.677781 |
| Match: | PF00674 |
| Description: | DUP family |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.934 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
|
Region A: Residues: [172-246] |
1 11 21 31 41 51
| | | | | |
1 VPDGSVCYTE KALQVYFTQI ERKWHWINSE GFLHNKTTQS VQFSKHGYGS KLLWAFKEVT 60
61 IMNSRFAFFS IAYLN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [247-380] |
1 11 21 31 41 51
| | | | | |
1 GLLTIPRLRN SLHILYVCAV LSSMIIEYLI GIDKFRFKSM NLIHKLQFLS YITCGHEKSD 60
61 ATNWSQIAKR TNTYMFEQKI WNSPILFSDG IDCEKFFKWY FSTPVSSQAS LSVGSTDFEL 120
121 WPYIKEAQSA CNDV
|
| Detection Method: | |
| Confidence: | 48.065502 |
| Match: | PF00674 |
| Description: | DUP family |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
