| Protein: | TOS8 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 276 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TOS8.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-51 | [1..276] | [1..276] |
|
|
1.0E-38 | [9..261] | [240..491] |
|
|
2.0E-37 | [2..269] | [341..608] |
|
|
4.0E-37 | [2..264] | [359..626] |
|
|
6.0E-37 | [46..271] | [137..369] |
|
Region A: Residues: [1-158] |
1 11 21 31 41 51
| | | | | |
1 MGTSIVNLNQ KIELPPIQVL FESLNRENET KPHFEERRLY QPNPSFVPRT NIAVGSPVNP 60
61 VPVSSPVFFI GPSPQRSIQN HNAIMTQNIR QYPVIYNNNR EVISTGERNY IITVGGPPVT 120
121 SSQPEYEHIS TPNFYQEQRL AQPHPVNESM MIGGYTNP
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [159-276] |
1 11 21 31 41 51
| | | | | |
1 QPISISRGKM LSGNISTNSV RGSNNGYSAK EKKHKAHGKR SNLPKATVSI LNKWLHEHVN 60
61 NPYPTVQEKR ELLAKTGLTK LQISNWFINA RRRKIFSGQN DANNFRRKFS SSTNLAKF
|
| Detection Method: | |
| Confidence: | 95.0 |
| Match: | 1b72B_ |
| Description: | pbx1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 1.77493186452261 | bayes_pls_golite062009 |
| DNA binding | 1.66680362591419 | bayes_pls_golite062009 |
| binding | 1.64929536290445 | bayes_pls_golite062009 |
| nucleic acid binding | 1.62223670236121 | bayes_pls_golite062009 |
| transcription factor activity | 1.03968483100366 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.10556378449224 | bayes_pls_golite062009 |
