| Protein: | ATG18 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 500 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATG18.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [2..499] | [903..1413] |
|
|
0.0 | [1..499] | [827..1296] |
|
Region A: Residues: [1-79] |
1 11 21 31 41 51
| | | | | |
1 MSDSSPTINF INFNQTGTCI SLGTSKGFKI FNCEPFGKFY SEDSGGYAIV EMLFSTSLLA 60
61 LVGIGDQPAL SPRRLRIIN
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.887 | 0.209 | protein targeting to vacuole | b.1.18 | E set domains |
| View | Download | 0.913 | 0.006 | protein targeting to vacuole | b.1.14 | Invasin/intimin cell-adhesion fragments |
| View | Download | 0.902 | 0.003 | protein targeting to vacuole | b.48.1 | mu transposase, C-terminal domain |
| View | Download | 0.829 | 0.003 | protein targeting to vacuole | b.114.1 | N-utilization substance G protein NusG, insert domain |
| View | Download | 0.842 | N/A | N/A | d.82.1 | Copper amine oxidase, domain N |
| View | Download | 0.825 | N/A | N/A | d.82.1 | Copper amine oxidase, domain N |
| View | Download | 0.785 | N/A | N/A | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.781 | N/A | N/A | b.1.2 | Fibronectin type III |
| View | Download | 0.774 | N/A | N/A | d.82.1 | Copper amine oxidase, domain N |
| View | Download | 0.767 | N/A | N/A | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.764 | N/A | N/A | b.84.1 | Single hybrid motif |
| View | Download | 0.761 | N/A | N/A | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.747 | N/A | N/A | b.1.18 | E set domains |
| View | Download | 0.746 | N/A | N/A | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.742 | N/A | N/A | b.7.2 | Periplasmic chaperone C-domain |
| View | Download | 0.724 | N/A | N/A | d.82.1 | Copper amine oxidase, domain N |
| View | Download | 0.716 | N/A | N/A | d.17.1 | Cystatin/monellin |
| View | Download | 0.713 | N/A | N/A | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.702 | N/A | N/A | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.694 | N/A | N/A | d.82.1 | Copper amine oxidase, domain N |
| View | Download | 0.681 | N/A | N/A | b.7.2 | Periplasmic chaperone C-domain |
| View | Download | 0.673 | N/A | N/A | d.82.1 | Copper amine oxidase, domain N |
| View | Download | 0.670 | N/A | N/A | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.662 | N/A | N/A | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.662 | N/A | N/A | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.661 | N/A | N/A | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.660 | N/A | N/A | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.654 | N/A | N/A | d.82.1 | Copper amine oxidase, domain N |
| View | Download | 0.647 | N/A | N/A | b.7.2 | Periplasmic chaperone C-domain |
| View | Download | 0.642 | N/A | N/A | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.632 | N/A | N/A | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.631 | N/A | N/A | b.1.1 | Immunoglobulin |
| View | Download | 0.630 | N/A | N/A | b.60.1 | Lipocalins |
| View | Download | 0.628 | N/A | N/A | b.1.1 | Immunoglobulin |
| View | Download | 0.626 | N/A | N/A | b.60.1 | Lipocalins |
| View | Download | 0.623 | N/A | N/A | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.622 | N/A | N/A | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.615 | N/A | N/A | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.610 | N/A | N/A | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.610 | N/A | N/A | b.1.18 | E set domains |
| View | Download | 0.604 | N/A | N/A | d.15.1 | Ubiquitin-like |
| View | Download | 0.603 | N/A | N/A | d.170.2 | A heparin-binding domain |
| View | Download | 0.601 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.601 | N/A | N/A | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.600 | N/A | N/A | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.597 | N/A | N/A | b.5.1 | alpha-Amylase inhibitor tendamistat |
| View | Download | 0.583 | N/A | N/A | d.82.1 | Copper amine oxidase, domain N |
| View | Download | 0.580 | N/A | N/A | b.7.2 | Periplasmic chaperone C-domain |
| View | Download | 0.576 | N/A | N/A | b.7.2 | Periplasmic chaperone C-domain |
| View | Download | 0.569 | N/A | N/A | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.567 | N/A | N/A | g.41.3 | Zinc beta-ribbon |
| View | Download | 0.558 | N/A | N/A | b.1.18 | E set domains |
| View | Download | 0.554 | N/A | N/A | b.1.20 | Tp47 lipoprotein, middle and C-terminal domains |
| View | Download | 0.553 | N/A | N/A | b.1.2 | Fibronectin type III |
| View | Download | 0.548 | N/A | N/A | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.547 | N/A | N/A | d.15.1 | Ubiquitin-like |
| View | Download | 0.544 | N/A | N/A | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.535 | N/A | N/A | b.1.18 | E set domains |
| View | Download | 0.528 | N/A | N/A | b.1.2 | Fibronectin type III |
| View | Download | 0.514 | N/A | N/A | b.1.1 | Immunoglobulin |
| View | Download | 0.510 | N/A | N/A | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.507 | N/A | N/A | d.82.1 | Copper amine oxidase, domain N |
| View | Download | 0.495 | N/A | N/A | b.60.1 | Lipocalins |
| View | Download | 0.494 | N/A | N/A | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.481 | N/A | N/A | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.477 | N/A | N/A | b.43.4 | Riboflavin synthase domain-like |
| View | Download | 0.468 | N/A | N/A | b.40.6 | MOP-like |
| View | Download | 0.467 | N/A | N/A | b.40.2 | Bacterial enterotoxins |
| View | Download | 0.467 | N/A | N/A | d.82.1 | Copper amine oxidase, domain N |
| View | Download | 0.466 | N/A | N/A | b.1.2 | Fibronectin type III |
| View | Download | 0.465 | N/A | N/A | b.24.1 | Hyaluronate lyase-like, C-terminal domain |
| View | Download | 0.458 | N/A | N/A | b.1.1 | Immunoglobulin |
| View | Download | 0.453 | N/A | N/A | b.1.1 | Immunoglobulin |
| View | Download | 0.450 | N/A | N/A | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.447 | N/A | N/A | d.88.1 | SRF-like |
| View | Download | 0.445 | N/A | N/A | b.1.1 | Immunoglobulin |
| View | Download | 0.441 | N/A | N/A | b.1.18 | E set domains |
| View | Download | 0.441 | N/A | N/A | b.61.2 | Metalloprotease inhibitor |
| View | Download | 0.440 | N/A | N/A | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.438 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.432 | N/A | N/A | b.34.9 | Tudor/PWWP/MBT |
| View | Download | 0.427 | N/A | N/A | b.1.1 | Immunoglobulin |
| View | Download | 0.427 | N/A | N/A | b.122.1 | PUA domain-like |
| View | Download | 0.425 | N/A | N/A | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.421 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.417 | N/A | N/A | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.415 | N/A | N/A | d.74.2 | C-terminal domain of arginine repressor |
| View | Download | 0.401 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.396 | N/A | N/A | b.34.9 | Tudor/PWWP/MBT |
| View | Download | 0.388 | N/A | N/A | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.386 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.385 | N/A | N/A | b.84.2 | Rudiment single hybrid motif |
| View | Download | 0.383 | N/A | N/A | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.379 | N/A | N/A | d.141.1 | Ribosomal protein L6 |
| View | Download | 0.379 | N/A | N/A | b.1.2 | Fibronectin type III |
| View | Download | 0.374 | N/A | N/A | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.371 | N/A | N/A | b.7.3 | PHL pollen allergen |
| View | Download | 0.370 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.358 | N/A | N/A | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.358 | N/A | N/A | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.355 | N/A | N/A | b.1.1 | Immunoglobulin |
| View | Download | 0.349 | N/A | N/A | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.346 | N/A | N/A | b.1.1 | Immunoglobulin |
| View | Download | 0.343 | N/A | N/A | d.131.1 | DNA clamp |
| View | Download | 0.343 | N/A | N/A | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.340 | N/A | N/A | d.9.2 | Description not found. |
| View | Download | 0.336 | N/A | N/A | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.335 | N/A | N/A | b.1.2 | Fibronectin type III |
| View | Download | 0.333 | N/A | N/A | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.333 | N/A | N/A | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.327 | N/A | N/A | b.60.1 | Lipocalins |
| View | Download | 0.326 | N/A | N/A | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.325 | N/A | N/A | a.43.1 | Met repressor-like |
| View | Download | 0.325 | N/A | N/A | b.1.2 | Fibronectin type III |
| View | Download | 0.324 | N/A | N/A | c.55.4 | Translational machinery components |
| View | Download | 0.319 | N/A | N/A | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.312 | N/A | N/A | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.310 | N/A | N/A | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.308 | N/A | N/A | b.1.18 | E set domains |
| View | Download | 0.303 | N/A | N/A | d.202.1 | Transcription factor NusA, N-terminal domain |
| View | Download | 0.297 | N/A | N/A | b.24.1 | Hyaluronate lyase-like, C-terminal domain |
| View | Download | 0.292 | N/A | N/A | d.47.1 | Ribosomal protein L11, N-terminal domain |
| View | Download | 0.292 | N/A | N/A | b.60.1 | Lipocalins |
| View | Download | 0.285 | N/A | N/A | d.105.1 | Clathrin adaptor appendage, alpha and beta chain-specific domain |
| View | Download | 0.281 | N/A | N/A | b.1.11 | PapD-like |
| View | Download | 0.279 | N/A | N/A | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.279 | N/A | N/A | b.84.1 | Single hybrid motif |
| View | Download | 0.278 | N/A | N/A | b.1.14 | Invasin/intimin cell-adhesion fragments |
| View | Download | 0.278 | N/A | N/A | b.40.6 | MOP-like |
| View | Download | 0.278 | N/A | N/A | b.1.18 | E set domains |
| View | Download | 0.276 | N/A | N/A | g.41.3 | Zinc beta-ribbon |
| View | Download | 0.272 | N/A | N/A | b.1.1 | Immunoglobulin |
| View | Download | 0.272 | N/A | N/A | b.1.14 | Invasin/intimin cell-adhesion fragments |
| View | Download | 0.268 | N/A | N/A | d.131.1 | DNA clamp |
| View | Download | 0.267 | N/A | N/A | b.1.1 | Immunoglobulin |
| View | Download | 0.266 | N/A | N/A | b.61.2 | Metalloprotease inhibitor |
| View | Download | 0.263 | N/A | N/A | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.262 | N/A | N/A | b.1.18 | E set domains |
| View | Download | 0.261 | N/A | N/A | b.38.1 | Sm-like ribonucleoproteins |
| View | Download | 0.261 | N/A | N/A | b.60.1 | Lipocalins |
| View | Download | 0.259 | N/A | N/A | b.1.18 | E set domains |
| View | Download | 0.256 | N/A | N/A | b.34.5 | Translation proteins SH3-like domain |
| View | Download | 0.256 | N/A | N/A | c.55.4 | Translational machinery components |
| View | Download | 0.256 | N/A | N/A | b.60.1 | Lipocalins |
| View | Download | 0.253 | N/A | N/A | b.40.2 | Bacterial enterotoxins |
| View | Download | 0.250 | N/A | N/A | b.60.1 | Lipocalins |
| View | Download | 0.235 | N/A | N/A | b.60.1 | Lipocalins |
| View | Download | 0.229 | N/A | N/A | b.85.5 | Tlp20, baculovirus telokin-like protein |
| View | Download | 0.226 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.224 | N/A | N/A | g.26.1 | Antifungal protein (AGAFP) |
| View | Download | 0.220 | N/A | N/A | b.85.5 | Tlp20, baculovirus telokin-like protein |
| View | Download | 0.217 | N/A | N/A | b.40.2 | Bacterial enterotoxins |
| View | Download | 0.217 | N/A | N/A | b.34.3 | Myosin S1 fragment, N-terminal domain |
| View | Download | 0.208 | N/A | N/A | g.41.3 | Zinc beta-ribbon |
| View | Download | 0.207 | N/A | N/A | b.85.5 | Tlp20, baculovirus telokin-like protein |
| View | Download | 0.206 | N/A | N/A | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.206 | N/A | N/A | b.40.2 | Bacterial enterotoxins |
| View | Download | 0.205 | N/A | N/A | b.80.3 | Cell-division inhibitor MinC, C-terminal domain |
| View | Download | 0.205 | N/A | N/A | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.204 | N/A | N/A | b.1.18 | E set domains |
|
Region A: Residues: [80-131] |
1 11 21 31 41 51
| | | | | |
1 TKKHSIICEV TFPTSILSVK MNKSRLVVLL QEQIYIYDIN TMRLLHTIET NP
|
| Detection Method: | |
| Confidence: | 64.69897 |
| Match: | 1gg2B_ |
| Description: | beta1-subunit of the signal-transducing G protein heterotrimer |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.8484919978091 | bayes_pls_golite062009 |
| protein binding | 1.42618832381942 | bayes_pls_golite062009 |
| transporter activity | 1.21549336905926 | bayes_pls_golite062009 |
| nucleic acid binding | 0.624115832843391 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.479978536094414 | bayes_pls_golite062009 |
| hydrolase activity | 0.36638536879917 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.359536347486199 | bayes_pls_golite062009 |
| signal transducer activity | 0.343972561304413 | bayes_pls_golite062009 |
| molecular transducer activity | 0.343972561304413 | bayes_pls_golite062009 |
| transcription regulator activity | 0.282387003961579 | bayes_pls_golite062009 |
|
Region A: Residues: [132-500] |
1 11 21 31 41 51
| | | | | |
1 NPRGLMAMSP SVANSYLVYP SPPKVINSEI KAHATTNNIT LSVGGNTETS FKRDQQDAGH 60
61 SDISDLDQYS SFTKRDDADP TSSNGGNSSI IKNGDVIVFN LETLQPTMVI EAHKGEIAAM 120
121 AISFDGTLMA TASDKGTIIR VFDIETGDKI YQFRRGTYAT RIYSISFSED SQYLAVTGSS 180
181 KTVHIFKLGH SMSNNKLDSD DSNMEEAAAD DSSLDTTSID ALSDEENPTR LAREPYVDAS 240
241 RKTMGRMIRY SSQKLSRRAA RTLGQIFPIK VTSLLESSRH FASLKLPVET NSHVMTISSI 300
301 GSPIDIDTSE YPELFETGNS ASTESYHEPV MKMVPIRVVS SDGYLYNFVM DPERGGDCLI 360
361 LSQYSILMD
|
| Detection Method: | |
| Confidence: | 62.69897 |
| Match: | 1erjA_ |
| Description: | Tup1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
