Protein: | UTP7 |
Organism: | Saccharomyces cerevisiae |
Length: | 554 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UTP7.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [3..458] | [984..1440] |
|
0.0 | [4..425] | [836..1257] |
Region A: Residues: [1-92] |
1 11 21 31 41 51 | | | | | | 1 MGHKKNGHRR QIKERENQNK FERSTYTNNA KNNHTQTKDK KLRAGLKKID EQYKKAVSSA 60 61 AATDYLLPES NGYLEPENEL EKTFKVQQSE IK |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.648 | a.1.1 | Globin-like |
View | Download | 0.508 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
View | Download | 0.485 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
View | Download | 0.515 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
View | Download | 0.470 | a.4.1 | Homeodomain-like |
View | Download | 0.460 | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
View | Download | 0.456 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
View | Download | 0.456 | a.61.1 | Retroviral matrix proteins |
View | Download | 0.447 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
View | Download | 0.440 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
View | Download | 0.407 | d.8.1 | Urease, gamma-subunit |
View | Download | 0.406 | f.32.1 | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
View | Download | 0.403 | a.24.17 | Group V grass pollen allergen |
View | Download | 0.395 | a.118.1 | ARM repeat |
View | Download | 0.371 | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.360 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
View | Download | 0.358 | a.4.12 | TrpR-like |
View | Download | 0.341 | a.7.7 | BAG domain |
View | Download | 0.340 | a.85.1 | Hemocyanin, N-terminal domain |
View | Download | 0.329 | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
View | Download | 0.326 | a.60.9 | lambda integrase-like, N-terminal domain |
View | Download | 0.313 | a.2.6 | Effector domain of the protein kinase pkn/prk1 |
View | Download | 0.312 | a.47.2 | t-snare proteins |
View | Download | 0.308 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
View | Download | 0.305 | a.40.1 | Calponin-homology domain, CH-domain |
View | Download | 0.304 | d.96.1 | Tetrahydrobiopterin biosynthesis enzymes-like |
View | Download | 0.288 | a.1.1 | Globin-like |
View | Download | 0.281 | a.112.1 | Description not found. |
View | Download | 0.277 | f.17.1 | F1F0 ATP synthase subunit C |
View | Download | 0.269 | a.64.1 | Saposin |
View | Download | 0.246 | a.2.7 | tRNA-binding arm |
View | Download | 0.243 | a.56.1 | CO dehydrogenase ISP C-domain like |
View | Download | 0.240 | a.2.7 | tRNA-binding arm |
View | Download | 0.234 | a.105.1 | FIS-like |
View | Download | 0.233 | a.51.1 | Cytochrome c oxidase subunit h |
View | Download | 0.227 | a.71.2 | Helical domain of Sec23/24 |
View | Download | 0.225 | d.150.1 | 4'-phosphopantetheinyl transferase |
View | Download | 0.225 | a.41.1 | Domain of poly(ADP-ribose) polymerase |
View | Download | 0.224 | a.26.1 | 4-helical cytokines |
View | Download | 0.223 | a.5.6 | Hypothetical protein MTH1615 |
View | Download | 0.220 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
View | Download | 0.213 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
View | Download | 0.209 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
Term | Confidence | Notes |
snoRNA binding | 6.03079504484743 | bayes_pls_golite062009 |
3.41022148055944 | bayes_pls_golite062009 | |
RNA binding | 3.0829625416797 | bayes_pls_golite062009 |
binding | 1.83286470399158 | bayes_pls_golite062009 |
transcription regulator activity | 1.25687092973217 | bayes_pls_golite062009 |
nucleic acid binding | 1.20712373307552 | bayes_pls_golite062009 |
structural molecule activity | 1.20572493724069 | bayes_pls_golite062009 |
protein binding | 0.987581964031738 | bayes_pls_golite062009 |
DNA binding | 0.711274653406079 | bayes_pls_golite062009 |
cytoskeletal protein binding | 0.523052412917759 | bayes_pls_golite062009 |
transcription factor activity | 0.243992994917491 | bayes_pls_golite062009 |
mRNA binding | 0.0519838181830878 | bayes_pls_golite062009 |
ligase activity | 0.00971558442368137 | bayes_pls_golite062009 |
Region A: Residues: [93-448] |
1 11 21 31 41 51 | | | | | | 1 SSVDVSTANK ALDLSLKEFG PYHIKYAKNG THLLITGRKG HVASMDWRKG QLRAELFLNE 60 61 TCHSATYLQN EQYFAVAQKK YTFIYDHEGT ELHRLKQHIE ARHLDFLPYH YLLVTAGETG 120 121 WLKYHDVSTG QLVSELRTKA GPTMAMAQNP WNAVMHLGHS NGTVSLWSPS MPEPLVKLLS 180 181 ARGPVNSIAI DRSGYYMATT GADRSMKIWD IRNFKQLHSV ESLPTPGTNV SISDTGLLAL 240 241 SRGPHVTLWK DALKLSGDSK PCFGSMGGNP HRNTPYMSHL FAGNKVENLG FVPFEDLLGV 300 301 GHQTGITNLI VPGAGEANYD ALELNPFETK KQRQEQEVRT LLNKLPADTI TLDPNS |
Detection Method: | |
Confidence: | 82.522879 |
Match: | 1gg2B_ |
Description: | beta1-subunit of the signal-transducing G protein heterotrimer |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [449-554] |
1 11 21 31 41 51 | | | | | | 1 IGSVDKRSST IRLNAKDLAQ TTMDANNKAK TNSDIPDVKP DVKGKNSGLR SFLRKKTQNV 60 61 IDERKLRVQK QLDKEKNIRK RNHQIKQGLI SEDHKDVIEE ALSRFG |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.340 | a.29.2 | Bromodomain |
View | Download | 0.293 | a.7.8 | GAT domain |
View | Download | 0.216 | a.24.4 | Hemerythrin |
View | Download | 0.219 | i.11.1 | Computational models partly based on NMR data |
View | Download | 0.216 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
View | Download | 0.208 | a.4.5 | "Winged helix" DNA-binding domain |