Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YER064C.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..505] | [1..505] |
|
|
0.0 | [80..505] | [1..421] |
|
Region A: Residues: [1-211] |
1 11 21 31 41 51
| | | | | |
1 MIDDTENSKI HLEGSHKTGK YTGYGTTHKI RAQLNFNDEK KWKKFSSRRL ELIDSFGLSQ 60
61 HKASEQDDNI RQIATILRSE FEYPDTFSAE FEKLVTAAVQ SVRRNRKRSK KKLLDSKKKI 120
121 ARGKVQKIPL SPPSSSNMGS CSASNASSSD EEASVKEEPA EHALPSLNTI TSQKLLPYPN 180
181 GRTLPPVPTQ VRSLLKKNAS LLRDPSAPYA H
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [212-444] |
1 11 21 31 41 51
| | | | | |
1 GGDEKLQKFD IEDQPLESEQ EYDFIAKSII VEIVNNAIPL PEQIQRDKFI RPNLTKKKGC 60
61 QSKVVISNNL RKLILSKIHN SRTCLEMSKD ERNLDSFANL ETLGKNSLMA SISLVVENSF 120
121 SHLPSSTKQY LTERLSSIEF LTILSQRLFM PATRQLFADL SQEKIQVRVL NLILGSLVKD 180
181 YGFDASLAPI NEIIYHMTLH QYPLVCSNKQ SNPMRPHSTS EVLSAHSSTK DAS
|
| Detection Method: | |
| Confidence: | 7.57 |
| Match: | 1jfzA |
| Description: | RNase III endonuclease catalytic domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleic acid binding | 3.56857846292068 | bayes_pls_golite062009 |
| binding | 3.16671084167938 | bayes_pls_golite062009 |
| DNA binding | 2.46976707655498 | bayes_pls_golite062009 |
| transcription regulator activity | 2.36798074064997 | bayes_pls_golite062009 |
| RNA binding | 1.64815102811033 | bayes_pls_golite062009 |
| protein binding | 1.33798788677218 | bayes_pls_golite062009 |
| structural constituent of ribosome | 1.28842676742386 | bayes_pls_golite062009 |
| transcription factor activity | 1.27008996745235 | bayes_pls_golite062009 |
| structural molecule activity | 1.15978347169403 | bayes_pls_golite062009 |
| double-stranded RNA binding | 0.402046758389082 | bayes_pls_golite062009 |
| transcription activator activity | 0.389298959802427 | bayes_pls_golite062009 |
| transcription repressor activity | 0.134687687018266 | bayes_pls_golite062009 |
| catalytic activity | 0.00430305721638241 | bayes_pls_golite062009 |
|
Region A: Residues: [445-505] |
1 11 21 31 41 51
| | | | | |
1 TPGKEEPRVT RSSTSADSTI ITLPSIEVPN TYDDDRLKML SAISLQIENS TFSKPFSTIS 60
61 K
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
