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Protein Overview: gi|151944779

General Information:
Name(s) found: gi|151944779 [NCBI NR]
Description(s) found:
  • gi|151944779|gb|EDN63038.1| conserved protein [Saccharomyces cerevisiae YJM789] [NCBI NR]
    • Organism: Saccharomyces cerevisiae YJM789
    Length: 505 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIDDTENSKI HLEGSHKTGK YTGYGTTHKI RAQLNFNDEK KWKKFSSRRL ELIDSFGLSQ  60
   61 HKASEQDDNI RQIATILRSE FEYPDTFSAE FEKLVTAAVQ SVRRNRKRSK KKLLDSKKKI 120
  121 ARGKVQKIPL SPPSSSNMGS CSASNASSSD EEASVKEEPA EHALPSLNTI TSQKLLPYPN 180
  181 GRTLPPVPTQ VRSLLKKNAS LLRDPSAPYA HGGDEKLQKF DIEDQPLESE QEYDFIAKSI 240
  241 IVEIVNNAIP LPEQIQRDKF IRPNLTKKKG CQSKVVISNN LRKLILSKIH NSRTCLEMSK 300
  301 DERNLDSFAN LETLGKNSLM ASISLVVENS FSHLPSSTKQ YLTERLSSIE FLTILSQRLF 360
  361 MPATRQLFAD LSQEKIQVRV LNLILGSLVK DYGFDASLAP INEIIYHMTL HQYPLVCSNK 420
  421 QSNPMRPHST SEVLSAHSST KDASTPGKEE PRVTRSSTSA DSTIITLPSI EVPNTYDDDR 480
  481 LKMLSAISLQ IENSTFSKPF STISK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..211] deduced N/A No confident structure predictions are available.
    2 View Details [212..444] ORFEUS 7.57 RNase III endonuclease catalytic domain
    3 View Details [445..505] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • nucleic acid binding
    		•  3.56857846292068 bayes_pls_golite062009
  • binding
    		•  3.16671084167938 bayes_pls_golite062009
  • DNA binding
    		•  2.46976707655498 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.36798074064997 bayes_pls_golite062009
  • RNA binding
    		•  1.64815102811033 bayes_pls_golite062009
  • protein binding
    		•  1.33798788677218 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  1.28842676742386 bayes_pls_golite062009
  • transcription factor activity
    		•  1.27008996745235 bayes_pls_golite062009
  • structural molecule activity
    		•  1.15978347169403 bayes_pls_golite062009
  • double-stranded RNA binding
    		•  0.402046758389082 bayes_pls_golite062009
  • transcription activator activity
    		•  0.389298959802427 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.134687687018266 bayes_pls_golite062009
  • catalytic activity
    		•  0.00430305721638241 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle