| Protein: | CIN8 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1038 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CIN8.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1038] | [1..1038] |
|
|
0.0 | [153..959] | [5..829] |
|
|
0.0 | [153..956] | [5..872] |
|
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0.0 | [153..1032] | [5..869] |
|
|
0.0 | [176..945] | [28..826] |
|
Region A: Residues: [1-64] |
1 11 21 31 41 51
| | | | | |
1 MVWPESNVEY RYRSKQFKGK SNKKYIKAQK IQQERICLMP AENQNTGQDR SSNSISKNGN 60
61 SQVG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.955 | 0.048 | mitotic spindle organization in nucleus | b.84.2 | Rudiment single hybrid motif |
|
Region A: Residues: [65-184] |
1 11 21 31 41 51
| | | | | |
1 CHTVPNEELN ITVAVRCRGR NEREISMKSS VVVNVPDITG SKEISINTTG DTGITAQMNA 60
61 KRYTVDKVFG PGASQDLIFD EVAGPLFQDF IKGYNCTVLV YGMTSTGKTY TMTGDEKLYN 120
121
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [185-547] |
1 11 21 31 41 51
| | | | | |
1 GELSDAAGII PRVLLKLFDT LELQQNDYVV KCSFIELYNE ELKDLLDSNS NGSSNTGFDG 60
61 QFMKKLRIFD SSTANNTTSN SASSSRSNSR NSSPRSLNDL TPKAALLRKR LRTKSLPNTI 120
121 KQQYQQQQAV NSRNNSSSNS GSTTNNASSN TNTNNGQRSS MAPNDQTNGI YIQNLQEFHI 180
181 TNAMEGLNLL QKGLKHRQVA STKMNDFSSR SHTIFTITLY KKHQDELFRI SKMNLVDLAG 240
241 SENINRSGAL NQRAKEAGSI NQSLLTLGRV INALVDKSGH IPFRESKLTR LLQDSLGGNT 300
301 KTALIATISP AKVTSEETCS TLEYASKAKN IKNKPQLGSF IMKDILVKNI TMELAKIKSD 360
361 LLS
|
| Detection Method: | |
| Confidence: | 586.491979 |
| Match: | 1ii6A_ |
| Description: | Kinesin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [548-735] |
1 11 21 31 41 51
| | | | | |
1 TKSKEGIYMS QDHYKNLNSD LESYKNEVQE CKREIESLTS KNALLVKDKL KSKETIQSQN 60
61 CQIESLKTTI DHLRAQLDKQ HKTEIEISDF NNKLQKLTEV MQMALHDYKK RELDLNQKFE 120
121 MHITKEIKKL KSTLFLQLNT MQQESILQET NIQPNLDMIK NEVLTLMRTM QEKAELMYKD 180
181 CVKKILNE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [736-1038] |
1 11 21 31 41 51
| | | | | |
1 SPKFFNVVIE KIDIIRVDFQ KFYKNIAENL SDISEENNNM KQYLKNHFFK NNHQELLNRH 60
61 VDSTYENIEK RTNEFVENFK KVLNDHLDEN KKLIMQNLTT ATSAVIDQEM DLFEPKRVKW 120
121 ENSFDLINDC DSMNNEFYNS MAATLSQIKS TVDTSSNSMN ESISVMKGQV EESENAISLL 180
181 KNNTKFNDQF EQLINKHNML KDNIKNSITS THSHITNVDD IYNTIENIMK NYGNKENATK 240
241 DEMIENILKE IPNLSKKMPL RLSNINSNSV QSVISPKKHA IEDENKSSEN VDNEGSRKML 300
301 KIE
|
| Detection Method: | |
| Confidence: | 11.30103 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
