| Protein: | CIN8 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1038 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CIN8.
| Description | E-value | Query Range |
Subject Range |
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0.0 | [1..1038] | [1..1038] |
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0.0 | [153..959] | [5..829] |
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0.0 | [153..956] | [5..872] |
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0.0 | [153..1032] | [5..869] |
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0.0 | [176..945] | [28..826] |
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Region A: Residues: [1-64] |
1 11 21 31 41 51
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1 MVWPESNVEY RYRSKQFKGK SNKKYIKAQK IQQERICLMP AENQNTGQDR SSNSISKNGN 60
61 SQVG
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| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
|
Region A: Residues: [65-184] |
1 11 21 31 41 51
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1 CHTVPNEELN ITVAVRCRGR NEREISMKSS VVVNVPDITG SKEISINTTG DTGITAQMNA 60
61 KRYTVDKVFG PGASQDLIFD EVAGPLFQDF IKGYNCTVLV YGMTSTGKTY TMTGDEKLYN 120
121
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.639 | 0.057 | mitotic spindle organization in nucleus | d.80.1 | Tautomerase/MIF |
| View | Download | 0.693 | 0.039 | mitotic spindle organization in nucleus | c.16.1 | Lumazine synthase |
| View | Download | 0.581 | 0.033 | mitotic spindle organization in nucleus | c.59.1 | MurD-like peptide ligases, peptide-binding domain |
| View | Download | 0.678 | 0.011 | mitotic spindle organization in nucleus | c.52.2 | tRNA splicing endonuclease, C-terminal domain |
| View | Download | 0.624 | N/A | N/A | d.79.2 | Tubulin/Dihydroxyacetone kinase C-terminal domain |
| View | Download | 0.561 | N/A | N/A | c.48.1 | TK C-terminal domain-like |
| View | Download | 0.555 | N/A | N/A | c.95.1 | Thiolase-like |
| View | Download | 0.554 | N/A | N/A | c.52.1 | Restriction endonuclease-like |
| View | Download | 0.552 | N/A | N/A | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
| View | Download | 0.545 | N/A | N/A | c.13.2 | Anti-sigma factor antagonist SpoIIaa |
| View | Download | 0.514 | N/A | N/A | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.507 | N/A | N/A | c.23.1 | CheY-like |
| View | Download | 0.469 | N/A | N/A | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.455 | N/A | N/A | c.23.1 | CheY-like |
| View | Download | 0.454 | N/A | N/A | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.446 | N/A | N/A | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.438 | N/A | N/A | c.23.5 | Flavoproteins |
| View | Download | 0.437 | N/A | N/A | b.1.1 | Immunoglobulin |
| View | Download | 0.436 | N/A | N/A | d.20.1 | UBC-like |
| View | Download | 0.410 | N/A | N/A | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.409 | N/A | N/A | c.59.1 | MurD-like peptide ligases, peptide-binding domain |
| View | Download | 0.405 | N/A | N/A | d.73.1 | RuBisCO, small subunit |
| View | Download | 0.391 | N/A | N/A | c.13.2 | Anti-sigma factor antagonist SpoIIaa |
| View | Download | 0.377 | N/A | N/A | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.377 | N/A | N/A | d.129.4 | Cell-division protein ZipA, C-terminal domain |
| View | Download | 0.371 | N/A | N/A | c.16.1 | Lumazine synthase |
| View | Download | 0.362 | N/A | N/A | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.360 | N/A | N/A | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.355 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.355 | N/A | N/A | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
| View | Download | 0.342 | N/A | N/A | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.340 | N/A | N/A | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.336 | N/A | N/A | d.146.1 | Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain |
| View | Download | 0.334 | N/A | N/A | d.58.47 | Hypothetical protein VC0424 |
| View | Download | 0.331 | N/A | N/A | d.52.6 | BolA-like |
| View | Download | 0.329 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.328 | N/A | N/A | d.58.33 | Formylmethanofuran:tetrahydromethanopterin formyltransferase |
| View | Download | 0.326 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.326 | N/A | N/A | b.29.1 | Concanavalin A-like lectins/glucanases |
| View | Download | 0.318 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.315 | N/A | N/A | c.46.1 | Rhodanese/Cell cycle control phosphatase |
| View | Download | 0.311 | N/A | N/A | d.79.1 | YjgF-like |
| View | Download | 0.310 | N/A | N/A | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.303 | N/A | N/A | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.300 | N/A | N/A | c.55.1 | Actin-like ATPase domain |
| View | Download | 0.295 | N/A | N/A | c.49.1 | Pyruvate kinase, C-terminal domain |
| View | Download | 0.292 | N/A | N/A | d.68.1 | Translation initiation factor IF3, C-terminal domain |
| View | Download | 0.288 | N/A | N/A | b.1.18 | E set domains |
| View | Download | 0.281 | N/A | N/A | d.15.6 | Superantigen toxins, C-terminal domain |
| View | Download | 0.275 | N/A | N/A | d.58.13 | Anticodon-binding domain of PheRS |
| View | Download | 0.274 | N/A | N/A | d.58.33 | Formylmethanofuran:tetrahydromethanopterin formyltransferase |
| View | Download | 0.273 | N/A | N/A | c.46.1 | Rhodanese/Cell cycle control phosphatase |
| View | Download | 0.273 | N/A | N/A | b.8.1 | TRAF domain-like |
| View | Download | 0.265 | N/A | N/A | d.198.1 | Type III secretory system chaperone |
| View | Download | 0.263 | N/A | N/A | c.46.1 | Rhodanese/Cell cycle control phosphatase |
| View | Download | 0.261 | N/A | N/A | d.134.1 | Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 |
| View | Download | 0.260 | N/A | N/A | d.227.1 | OsmC-like |
| View | Download | 0.259 | N/A | N/A | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.252 | N/A | N/A | c.61.1 | PRTase-like |
| View | Download | 0.246 | N/A | N/A | c.23.4 | Succinyl-CoA synthetase domains |
| View | Download | 0.246 | N/A | N/A | c.23.5 | Flavoproteins |
| View | Download | 0.243 | N/A | N/A | b.40.2 | Bacterial enterotoxins |
| View | Download | 0.233 | N/A | N/A | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.233 | N/A | N/A | c.43.1 | CoA-dependent acyltransferases |
| View | Download | 0.232 | N/A | N/A | c.23.5 | Flavoproteins |
| View | Download | 0.228 | N/A | N/A | c.23.1 | CheY-like |
| View | Download | 0.227 | N/A | N/A | d.118.1 | N-acetylmuramoyl-L-alanine amidase-like |
| View | Download | 0.226 | N/A | N/A | c.97.1 | Cytidine deaminase-like |
| View | Download | 0.226 | N/A | N/A | c.84.1 | Phosphoglucomutase, first 3 domains |
| View | Download | 0.226 | N/A | N/A | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
| View | Download | 0.226 | N/A | N/A | c.52.3 | Eukaryotic RPB5 N-terminal domain |
| View | Download | 0.221 | N/A | N/A | c.23.6 | Cobalamin (vitamin B12)-binding domain |
| View | Download | 0.220 | N/A | N/A | d.208.1 | MTH1598-like |
| View | Download | 0.216 | N/A | N/A | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.215 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.207 | N/A | N/A | c.32.1 | Tubulin/Dihydroxyacetone kinase nucleotide-binding domain |
| View | Download | 0.206 | N/A | N/A | b.45.1 | FMN-binding split barrel |
| View | Download | 0.205 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
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Region A: Residues: [185-547] |
1 11 21 31 41 51
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1 GELSDAAGII PRVLLKLFDT LELQQNDYVV KCSFIELYNE ELKDLLDSNS NGSSNTGFDG 60
61 QFMKKLRIFD SSTANNTTSN SASSSRSNSR NSSPRSLNDL TPKAALLRKR LRTKSLPNTI 120
121 KQQYQQQQAV NSRNNSSSNS GSTTNNASSN TNTNNGQRSS MAPNDQTNGI YIQNLQEFHI 180
181 TNAMEGLNLL QKGLKHRQVA STKMNDFSSR SHTIFTITLY KKHQDELFRI SKMNLVDLAG 240
241 SENINRSGAL NQRAKEAGSI NQSLLTLGRV INALVDKSGH IPFRESKLTR LLQDSLGGNT 300
301 KTALIATISP AKVTSEETCS TLEYASKAKN IKNKPQLGSF IMKDILVKNI TMELAKIKSD 360
361 LLS
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| Detection Method: | |
| Confidence: | 586.491979 |
| Match: | 1ii6A_ |
| Description: | Kinesin |
Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [548-735] |
1 11 21 31 41 51
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1 TKSKEGIYMS QDHYKNLNSD LESYKNEVQE CKREIESLTS KNALLVKDKL KSKETIQSQN 60
61 CQIESLKTTI DHLRAQLDKQ HKTEIEISDF NNKLQKLTEV MQMALHDYKK RELDLNQKFE 120
121 MHITKEIKKL KSTLFLQLNT MQQESILQET NIQPNLDMIK NEVLTLMRTM QEKAELMYKD 180
181 CVKKILNE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [736-1038] |
1 11 21 31 41 51
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1 SPKFFNVVIE KIDIIRVDFQ KFYKNIAENL SDISEENNNM KQYLKNHFFK NNHQELLNRH 60
61 VDSTYENIEK RTNEFVENFK KVLNDHLDEN KKLIMQNLTT ATSAVIDQEM DLFEPKRVKW 120
121 ENSFDLINDC DSMNNEFYNS MAATLSQIKS TVDTSSNSMN ESISVMKGQV EESENAISLL 180
181 KNNTKFNDQF EQLINKHNML KDNIKNSITS THSHITNVDD IYNTIENIMK NYGNKENATK 240
241 DEMIENILKE IPNLSKKMPL RLSNINSNSV QSVISPKKHA IEDENKSSEN VDNEGSRKML 300
301 KIE
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| Detection Method: | |
| Confidence: | 11.30103 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
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