| Protein: | GDA1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 518 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDA1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..518] | [1..518] |
|
|
0.0 | [4..515] | [6..518] |
|
|
0.0 | [58..515] | [130..595] |
|
|
0.0 | [60..516] | [89..553] |
|
|
0.0 | [71..516] | [90..555] |
|
|
0.0 | [60..516] | [103..553] |
|
|
0.0 | [78..505] | [41..465] |
|
|
0.0 | [78..505] | [34..459] |
|
|
0.0 | [52..503] | [46..520] |
|
Region A: Residues: [1-277] |
1 11 21 31 41 51
| | | | | |
1 MAPIFRNYRF AIGAFAVIML ILLIKTSSIG PPSIARTVTP NASIPKTPED ISILPVNDEP 60
61 GYLQDSKTEQ NYPELADAVK SQTSQTCSEE HKYVIMIDAG STGSRVHIYK FDVCTSPPTL 120
121 LDEKFDMLEP GLSSFDTDSV GAANSLDPLL KVAMNYVPIK ARSCTPVAVK ATAGLRLLGD 180
181 AKSSKILSAV RDHLEKDYPF PVVEGDGVSI MGGDEEGVFA WITTNYLLGN IGANGPKLPT 240
241 AAVFDLGGGS TQIVFEPTFP INEKMVDGEH KFDLKFG
|
| Detection Method: |  |
| Confidence: | 7.08 |
| Match: | 1bg3A |
| Description: | Mammalian type I hexokinase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| substrate-specific transporter activity | 2.6067350860805 | bayes_pls_golite062009 |
| binding | 1.67810028738512 | bayes_pls_golite062009 |
| kinase activity | 1.49017495306118 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.41202247176912 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.17094423081025 | bayes_pls_golite062009 |
| carbohydrate kinase activity | 0.918413613159579 | bayes_pls_golite062009 |
| protein binding | 0.909114722614987 | bayes_pls_golite062009 |
| peptide binding | 0.512219022453579 | bayes_pls_golite062009 |
| hexokinase activity | 0.3464071310254 | bayes_pls_golite062009 |
| catalytic activity | 0.308539563780047 | bayes_pls_golite062009 |
| protein kinase activity | 0.273427627634136 | bayes_pls_golite062009 |
| nucleic acid binding | 0.157726298952452 | bayes_pls_golite062009 |
| glucokinase activity | 0.0827631486617343 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0562867443774764 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.0272188887044016 | bayes_pls_golite062009 |
|
Region A: Residues: [278-518] |
1 11 21 31 41 51
| | | | | |
1 DENYTLYQFS HLGYGLKEGR NKVNSVLVEN ALKDGKILKG DNTKTHQLSS PCLPPKVNAT 60
61 NEKVTLESKE TYTIDFIGPD EPSGAQCRFL TDEILNKDAQ CQSPPCSFNG VHQPSLVRTF 120
121 KESNDIYIFS YFYDRTRPLG MPLSFTLNEL NDLARIVCKG EETWNSVFSG IAGSLDELES 180
181 DSHFCLDLSF QVSLLHTGYD IPLQRELRTG KKIANKEIGW CLGASLPLLK ADNWKCKIQS 240
241 A
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [439-518] |
1 11 21 31 41 51
| | | | | |
1 ETWNSVFSGI AGSLDELESD SHFCLDLSFQ VSLLHTGYDI PLQRELRTGK KIANKEIGWC 60
61 LGASLPLLKA DNWKCKIQSA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
