| Protein: | STP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 577 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for STP1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [3..501] | [291..820] |
|
|
0.0 | [3..505] | [323..854] |
|
|
0.0 | [3..490] | [148..650] |
|
Region A: Residues: [1-168] |
1 11 21 31 41 51
| | | | | |
1 MNCITIDVFF TAFSHPCKRK KKQADSCINC KDSLIKSRFT LQTKGKGKLY RLYHIRSKMP 60
61 STTLLFPQKH IRAIPGKIYA FFRELVSGVI ISKPDLSHHY SCENATKEEG KDAADEEKTT 120
121 TSLFPESNNI DRSLNGGCSV IPCSMDVSDL NTPISITLSP ENRIKSEV
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [169-270] |
1 11 21 31 41 51
| | | | | |
1 NAKSLLGSRP EQDTGAPIKM STGVTSSPLS PSGSTPEHST KVLNNGEEEF ICHYCDATFR 60
61 IRGYLTRHIK KHAIEKAYHC PFFNSATPPD LRCHNSGGFS RR
|
| Detection Method: | |
| Confidence: | 28.0 |
| Match: | 1meyG_ |
| Description: | Designed zinc finger protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [271-323] |
1 11 21 31 41 51
| | | | | |
1 DTYKTHLKAR HVLYPKGVKP QDRNKSSGHC AQCGEYFSTI ENFVENHIES GDC
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [324-475] |
1 11 21 31 41 51
| | | | | |
1 KALPQGYTKK NEKRSGKLRK IKTSNGHSRF ISTSQSVVEP KVLFNKDAVE AMTIVANNSS 60
61 GNDIISKYGN NKLMLNSENF KVDIPKRKRK YIKKKQQQVS GSTVTTPEVA TQNNQEVAPD 120
121 EISSATIFSP FDTHLLEPVP SSSSESSAEV MF
|
| Detection Method: | |
| Confidence: | 18.69897 |
| Match: | 1ubdC_ |
| Description: | Ying-yang 1 (yy1, zinc finger domain) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [476-577] |
1 11 21 31 41 51
| | | | | |
1 HGKQMKNFLI DINSFTNQQQ QAQDNPSFLP LDIEQSSYDL SEDAMSYPII STQSNRDCTQ 60
61 YDNTKISQIL QSQLNPEYLS ENHMRETQQY LNFYNDNFGS QF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
