YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: STP1

General Information:
Name(s) found: STP1 / YDR463W [SGD]
Description(s) found:
Found 13 descriptions.
SHOW ALL
  • Transcription factor, undergoes proteolytic processing by SPS (Ssy1p-Ptr3p-Ssy5p)-sensor component Ssy5p in response to extracellular amino acids; activates transcription of amino acid permease genes and may have a role in tRNA processing [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 577 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    Biological Process: tRNA splicing, via endonucleolytic cleavage and ligation [IMPLink to PubMed article]
    positive regulation of transcription [IDALink to PubMed article]
    positive regulation of transcription from RNA polymerase II promoter [IGILink to PubMed article][IMPLink to PubMed article][ISSLink to PubMed article]
    Molecular Function: transcription factor activity [IDALink to PubMed article]
    specific RNA polymerase II transcription factor activity [IGILink to PubMed article][IMPLink to PubMed article][ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNCITIDVFF TAFSHPCKRK KKQADSCINC KDSLIKSRFT LQTKGKGKLY RLYHIRSKMP  60
   61 STTLLFPQKH IRAIPGKIYA FFRELVSGVI ISKPDLSHHY SCENATKEEG KDAADEEKTT 120
  121 TSLFPESNNI DRSLNGGCSV IPCSMDVSDL NTPISITLSP ENRIKSEVNA KSLLGSRPEQ 180
  181 DTGAPIKMST GVTSSPLSPS GSTPEHSTKV LNNGEEEFIC HYCDATFRIR GYLTRHIKKH 240
  241 AIEKAYHCPF FNSATPPDLR CHNSGGFSRR DTYKTHLKAR HVLYPKGVKP QDRNKSSGHC 300
  301 AQCGEYFSTI ENFVENHIES GDCKALPQGY TKKNEKRSGK LRKIKTSNGH SRFISTSQSV 360
  361 VEPKVLFNKD AVEAMTIVAN NSSGNDIISK YGNNKLMLNS ENFKVDIPKR KRKYIKKKQQ 420
  421 QVSGSTVTTP EVATQNNQEV APDEISSATI FSPFDTHLLE PVPSSSSESS AEVMFHGKQM 480
  481 KNFLIDINSF TNQQQQAQDN PSFLPLDIEQ SSYDLSEDAM SYPIISTQSN RDCTQYDNTK 540
  541 ISQILQSQLN PEYLSENHMR ETQQYLNFYN DNFGSQF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..168] MSA 14.019996 View MSA. No confident structure predictions are available.
    2 View Details [169..270] PSI-BLAST 28.0 Designed zinc finger protein
    3 View Details [271..323] deduced N/A No confident structure predictions are available.
    4 View Details [324..475] PSI-BLAST 18.69897 Ying-yang 1 (yy1, zinc finger domain)
    5 View Details [476..577] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle