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View Structure Prediction Details

Protein: DOT1
Organism: Saccharomyces cerevisiae
Length: 582 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DOT1.

Description E-value Query
Range
Subject
Range
DOT1 - Nucleosomal histone H3-Lys79 methylase; methylation is required for telomeric silencing, meiotic che...
DOT1_YEAST - Histone-lysine N-methyltransferase, H3 lysine-79 specific OS=Saccharomyces cerevisiae (strain ATCC 2...
0.0 [1..582] [1..582]
gi|2995577 - gi|2995577|gb|AAC08316.1| R29381_1 [Homo sapiens]
3.0E-62 [293..580] [6..300]
gi|11277873 - pir||A81324 cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) Cj1183c [similarity] - Campy...
gi|15792507, gi|... - gi|6968616|emb|CAB73437.1| putative cyclopropane-fatty-acyl-phospholipid synthase [Campylobacter jej...
7.0E-49 [247..569] [25..345]
gi|15894164, gi|... - gi|15894164|ref|NP_347513.1| cyclopropane fatty acid synthase [Clostridium acetobutylicum ATCC 824],...
gi|25300077 - pir||B97008 cyclopropane fatty acid synthase [imported] - Clostridium acetobutylicum
7.0E-45 [249..507] [30..270]
CE03424 - status:Partially_confirmed UniProt:Q20856 protein_id:CAA90610.1
7.0E-44 [344..579] [129..365]
gi|7443722 - pir||H64571 cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) - Helicobacter pylori (strai...
gi|2313520, gi|1... - gi|2313520|gb|AAD07482.1| cyclopropane fatty acid synthase (cfa) [Helicobacter pylori 26695], gi|156...
5.0E-37 [267..569] [47..347]
gi|13492588 - gi|13492588|gb|AAK28284.1| unknown [Leishmania major]
1.0E-36 [341..552] [152..358]
gi|7443721 - pir||B71865 cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) - Helicobacter pylori (strai...
gi|4155557, gi|1... - gi|4155557|gb|AAD06552.1| CYCLOPOCYCLOPROPANE FATTY ACID SYNTHASE [Helicobacter pylori J99], gi|1561...
4.0E-36 [267..532] [47..301]

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Predicted Domain #1
Region A:
Residues: [1-174]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGQESISNN NSDSFIMSSP NLDSQESSIS PIDEKKGTDM QTKSLSSYSK GTLLSKQVQN  60
   61 LLEEANKYDP IYGSSLPRGF LRDRNTKGKD NGLVPLVEKV IPPIHKKTNN RNTRKKSSTT 120
  121 TKKDVKKPKA AKVKGKNGRT NHKHTPISKQ EIDTAREKKP LKKGRANKKN DRDS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [175-327]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSSTFVDWNG PCLRLQYPLF DIEYLRSHEI YSGTPIQSIS LRTNSPQPTS LTSDNDTSSV  60
   61 TTAKLQSILF SNYMEEYKVD FKRSTAIYNP MSEIGKLIEY SCLVFLPSPY AEQLKETILP 120
  121 DLNASFDNSD TKGFVNAINL YNKMIREIPR QRI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.286 0.289 histone methylation b.40.4 Nucleic acid-binding proteins
View Download 0.278 0.094 histone methylation a.118.1 ARM repeat
View Download 0.350 0.091 histone methylation b.2.5 p53-like transcription factors
View Download 0.424 0.077 histone methylation a.118.8 TPR-like
View Download 0.286 0.011 histone methylation a.24.10 Histidine-containing phosphotransfer domain, HPT domain
View Download 0.225 N/A N/A a.25.1 Ferritin-like
View Download 0.219 N/A N/A a.149.1 RNase III endonuclease catalytic domain

Predicted functions:

Term Confidence Notes
protein methyltransferase activity 5.03267617653315 bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity 4.4632173842967 bayes_pls_golite062009
histone methyltransferase activity 4.40911163698179 bayes_pls_golite062009
methyltransferase activity 4.15445027778357 bayes_pls_golite062009
N-methyltransferase activity 4.07806017452628 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 4.07153733729662 bayes_pls_golite062009
protein-arginine N-methyltransferase activity 3.26663548517117 bayes_pls_golite062009
arginine N-methyltransferase activity 3.26663548517117 bayes_pls_golite062009
histone-arginine N-methyltransferase activity 2.86617323549909 bayes_pls_golite062009
protein-arginine omega-N monomethyltransferase activity 2.48017990451667 bayes_pls_golite062009
histone methyltransferase activity (H4-R3 specific) 2.25250509433971 bayes_pls_golite062009
transferase activity 2.22303238506686 bayes_pls_golite062009
DNA-methyltransferase activity 2.18991764495147 bayes_pls_golite062009
transcription regulator activity 2.0187748912503 bayes_pls_golite062009
rRNA methyltransferase activity 1.93505048403302 bayes_pls_golite062009
DNA binding 1.86585662505513 bayes_pls_golite062009
nucleic acid binding 1.71901340148111 bayes_pls_golite062009
protein-arginine omega-N asymmetric methyltransferase activity 1.69391860928068 bayes_pls_golite062009
catalytic activity 1.25333584501255 bayes_pls_golite062009
binding 0.976078016260105 bayes_pls_golite062009
histone binding 0.964746527369069 bayes_pls_golite062009
protein-arginine omega-N symmetric methyltransferase activity 0.865238728135767 bayes_pls_golite062009
lysine N-methyltransferase activity 0.858129308056814 bayes_pls_golite062009
protein-lysine N-methyltransferase activity 0.858129308056814 bayes_pls_golite062009
histone-lysine N-methyltransferase activity 0.858129308056814 bayes_pls_golite062009
RNA methyltransferase activity 0.817509452491588 bayes_pls_golite062009
site-specific DNA-methyltransferase (adenine-specific) activity 0.703178429468566 bayes_pls_golite062009
rRNA (adenine) methyltransferase activity 0.229189844833659 bayes_pls_golite062009
rRNA (adenine-N6,N6-)-dimethyltransferase activity 0.152064081957651 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [328-391]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IDHLETIDKI PRSFIHDFLH IVYTRSIHPQ ANKLKHYKAF SNYVYGELLP NFLSDVYQQC  60
   61 QLKK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [392-511]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDTFMDLGSG VGNCVVQAAL ECGCALSFGC EIMDDASDLT ILQYEELKKR CKLYGMRLNN  60
   61 VEFSLKKSFV DNNRVAELIP QCDVILVNNF LFDEDLNKKV EKILQTAKVG CKIISLKSLR 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 680.211549
Match: 1m0rA_
Description: No description for 1m0rA_ was found.

Predicted Domain #5
Region A:
Residues: [512-582]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLTYQINFYN VENIFNRLKV QRYDLKEDSV SWTHSGGEYY ISTVMEDVDE SLFSPAARGR  60
   61 RNRGTPVKYT R

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.559 d.58.1 4Fe-4S ferredoxins
View Download 0.686 d.58.17 Metal-binding domain
View Download 0.572 d.52.1 Alpha-lytic protease prodomain
View Download 0.681 d.58.24 CheY-binding domain of CheA
View Download 0.619 d.58.17 Metal-binding domain
View Download 0.534 d.58.10 Acylphosphatase-like
View Download 0.523 d.58.18 Regulatory domain in the aminoacid metabolism
View Download 0.513 d.58.3 Protease propeptides/inhibitors
View Download 0.472 d.58.18 Regulatory domain in the aminoacid metabolism
View Download 0.453 d.58.17 Metal-binding domain
View Download 0.446 d.50.3 PI-Pfui intein middle domain
View Download 0.422 d.58.10 Acylphosphatase-like
View Download 0.401 d.58.17 Metal-binding domain
View Download 0.397 d.58.10 Acylphosphatase-like
View Download 0.397 d.58.11 EF-G/eEF-2 domains III and V
View Download 0.394 d.141.1 Ribosomal protein L6
View Download 0.385 d.58.2 Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
View Download 0.382 a.52.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
View Download 0.381 d.58.10 Acylphosphatase-like
View Download 0.374 g.44.1 RING/U-box
View Download 0.365 d.58.7 RNA-binding domain, RBD
View Download 0.365 a.65.1 Annexin
View Download 0.362 d.58.5 GlnB-like
View Download 0.354 d.58.3 Protease propeptides/inhibitors
View Download 0.353 d.58.10 Acylphosphatase-like
View Download 0.334 d.58.49 YajQ-like
View Download 0.331 d.58.38 Urease metallochaperone UreE, C-terminal domain
View Download 0.325 a.28.3 Retrovirus capsid protein C-terminal domain
View Download 0.323 d.50.3 PI-Pfui intein middle domain
View Download 0.323 a.6.1 Putative DNA-binding domain
View Download 0.315 b.84.1 Single hybrid motif
View Download 0.315 d.58.17 Metal-binding domain
View Download 0.311 d.50.3 PI-Pfui intein middle domain
View Download 0.300 d.58.1 4Fe-4S ferredoxins
View Download 0.299 d.58.10 Acylphosphatase-like
View Download 0.297 a.163.1 Crustacean CHH/MIH/GIH neurohormone
View Download 0.281 d.58.7 RNA-binding domain, RBD
View Download 0.277 d.58.11 EF-G/eEF-2 domains III and V
View Download 0.275 a.6.1 Putative DNA-binding domain
View Download 0.270 d.58.10 Acylphosphatase-like
View Download 0.256 a.163.1 Crustacean CHH/MIH/GIH neurohormone
View Download 0.241 b.61.3 D-aminopeptidase, middle and C-terminal domains
View Download 0.241 d.19.1 MHC antigen-recognition domain
View Download 0.240 d.58.1 4Fe-4S ferredoxins
View Download 0.238 d.58.1 4Fe-4S ferredoxins
View Download 0.236 b.71.1 Glycosyl hydrolase domain
View Download 0.235 g.3.11 EGF/Laminin
View Download 0.234 a.77.1 DEATH domain
View Download 0.229 d.58.4 Dimeric alpha+beta barrel
View Download 0.223 d.58.7 RNA-binding domain, RBD
View Download 0.219 a.35.1 lambda repressor-like DNA-binding domains


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle