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View Structure Prediction Details

Protein: TIM11
Organism: Saccharomyces cerevisiae
Length: 96 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TIM11.

Description E-value Query
Range
Subject
Range
gi|151942299 - gi|151942299|gb|EDN60655.1| F1F0 ATP synthase subunit e [Saccharomyces cerevisiae YJM789]
gi|190404736 - gi|190404736|gb|EDV08003.1| ATP synthase e chain, mitochondrial [Saccharomyces cerevisiae RM11-1a]
TIM11 - Subunit e of mitochondrial F1F0-ATPase, which is a large, evolutionarily conserved enzyme complex re...
ATPJ_YEAST - ATP synthase subunit e, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TI...
6.0E-49 [1..96] [1..96]

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Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTVNVLRYS ALGLGLFFGF RNDMILKCNA KKKEEQAQYE EKLKLVEEAK KEYAKLHPVV  60
   61 TPKDVPANAS FNLEDPNIDF ERVILNAVES LKEAST

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.858 0.020 ATP synthesis coupled proton transport a.47.2 t-snare proteins


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle