| Protein: | TFB1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 642 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TFB1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..642] | [1..642] |
|
|
0.0 | [5..583] | [9..579] |
|
|
0.0 | [165..587] | [96..498] |
|
|
0.0 | [165..587] | [96..497] |
|
|
0.0 | [76..572] | [10..412] |
|
|
1.0E-75 | [164..444] | [78..357] |
|
Region A: Residues: [1-156] |
1 11 21 31 41 51
| | | | | |
1 MSHSGAAIFE KVSGIIAINE DVSPAELTWR STDGDKVHTV VLSTIDKLQA TPASSEKMML 60
61 RLIGKVDESK KRKDNEGNEV VPKPQRHMFS FNNRTVMDNI KMTLQQIISR YKDADIYEEK 120
121 RRREESAQHT ETPMSSSSVT AGTPTPHLDT PQLNNG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| nucleic acid binding | 1.85794418941003 | bayes_pls_golite062009 |
|
Region A: Residues: [157-238] |
1 11 21 31 41 51
| | | | | |
1 APLINTAKLD DSLSKEKLLT NLKLQQSLLK GNKVLMKVFQ ETVINAGLPP SEFWSTRIPL 60
61 LRAFALSTSQ KVGPYNVLST IK
|
| Detection Method: | |
| Confidence: | 11.60206 |
| Match: | PF03909 |
| Description: | BSD domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [239-352] |
1 11 21 31 41 51
| | | | | |
1 PVASSENKVN VNLSREKILN IFENYPIVKK AYTDNVPKNF KEPEFWARFF SSKLFRKLRG 60
61 EKIMQNDRGD VIIDRYLTLD QEFDRKDDDM LLHPVKKIID LDGNIQDDPV VRGN
|
| Detection Method: | |
| Confidence: | 15.69897 |
| Match: | PF03909 |
| Description: | BSD domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [353-642] |
1 11 21 31 41 51
| | | | | |
1 RPDFTMQPGV DINGNSDGTV DILKGMNRLS EKMIMALKNE YSRTNLQNKS NITNDEEDED 60
61 NDERNELKID DLNESYKTNY AIIHLKRNAH EKTTDNDAKS SADSIKNADL KVSNQQMLQQ 120
121 LSLVMDNLIN KLDLNQVVPN NEVSNKINKR VITAIKINAK QAKHNNVNSA LGSFVDNTSQ 180
181 ANELEVKSTL PIDLLESCRM LHTTCCEFLK HFYIHFQSGE QKQASTVKKL YNHLKDCIEK 240
241 LNELFQDVLN GDGESMSNTC TAYLKPVLNS ITLATHKYDE YFNEYNNNSN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [570-642] |
1 11 21 31 41 51
| | | | | |
1 SGEQKQASTV KKLYNHLKDC IEKLNELFQD VLNGDGESMS NTCTAYLKPV LNSITLATHK 60
61 YDEYFNEYNN NSN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
