| Protein: | MSS4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 779 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MSS4.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..779] | [1..779] |
|
|
0.0 | [163..770] | [19..678] |
|
|
0.0 | [327..766] | [24..465] |
|
|
0.0 | [317..768] | [3..438] |
|
|
0.0 | [313..757] | [7..444] |
|
|
0.0 | [277..774] | [51..597] |
|
Region A: Residues: [1-299] |
1 11 21 31 41 51
| | | | | |
1 MSVLRSQPPS VVPLHLTTST SRKTEQEPSL LHSAIIERHQ DRSVPNSNSN PDSNHRIKKD 60
61 RNNHTSYHSS SNSESNMESP RLSDGESSTP TSIEELNPTI NNSRLVKRNY SISIDPLHDN 120
121 SNNNTDDDHP NTITSPRPNS TSNKEMQKYS FPEGKESKKI TTPSLNSNNC LDLDNSSLVH 180
181 TDSYIQDLND DHILLNKRVS RRSSRISAVT ATSTTIKQRR NTQDSNLPNI PFHASKHSQI 240
241 LPMDDSDVIK LANGDTSMKP NSATKISHSM TSLPLHPLPQ PSQKSKQYHM ISKSTTSLP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [300-556] |
1 11 21 31 41 51
| | | | | |
1 PENDHYYQHS RGTNHNHAAN AAAVNNNTTT TTAATGLKRS ESATAEIKKM RQSLLHKREM 60
61 KRKRKTFLVD DDRVLIGNKV SEGHVNFIIA YNMLTGIRVA VSRCSGIMKP LTPADFRFTK 120
121 KLAFDYHGNE LTPSSQYAFK FKDYCPEVFR ELRALFGLDP ADYLVSLTSK YILSELNSPG 180
181 KSGSFFYYSR DYKYIIKTIH HSEHIHLRKH IQEYYNHVRD NPNTLICQFY GLHRVKMPIS 240
241 FQNKIKHRKI YFLVMNN
|
| Detection Method: | |
| Confidence: | 481.228787 |
| Match: | 1bo1A_ |
| Description: | Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| inositol or phosphatidylinositol kinase activity | 4.31726963575315 | bayes_pls_golite062009 |
| lipid kinase activity | 3.63026201392483 | bayes_pls_golite062009 |
| phosphatidylinositol phosphate kinase activity | 3.5005619620026 | bayes_pls_golite062009 |
| 1-phosphatidylinositol-4-phosphate 5-kinase activity | 3.00599233846946 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 2.8512866333787 | bayes_pls_golite062009 |
| kinase activity | 2.68971389233526 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 2.48646215276903 | bayes_pls_golite062009 |
| catalytic activity | 1.87792712964225 | bayes_pls_golite062009 |
| binding | 1.66593042987179 | bayes_pls_golite062009 |
| transferase activity | 1.20817067352467 | bayes_pls_golite062009 |
| signal transducer activity | 1.15068527302487 | bayes_pls_golite062009 |
| molecular transducer activity | 1.15068527302487 | bayes_pls_golite062009 |
| protein kinase activity | 0.709372924978886 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 0.489382280175196 | bayes_pls_golite062009 |
| ligase activity | 0.435608917599349 | bayes_pls_golite062009 |
| protein binding | 0.382966234080422 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.189737258618863 | bayes_pls_golite062009 |
|
Region A: Residues: [557-779] |
1 11 21 31 41 51
| | | | | |
1 LFPPHLDIHI TYDLKGSTWG RFTNLDKERL AKDRSYRPVM KDLNWLEEGQ KIKFGPLKKK 60
61 TFLTQLKKDV ELLAKLNTMD YSLLIGIHDI NKAKEDDLQL ADTASIEEQP QTQGPIRTGT 120
121 GTVVRHFFRE FEGGIRASDQ FNNDVDLIYY VGIIDFLTNY SVMKKLETFW RSLRHDTKLV 180
181 SAIPPRDYAN RFYEFIEDSV DPLPQKKTQS SYRDDPNQKN YKD
|
| Detection Method: | |
| Confidence: | 481.228787 |
| Match: | 1bo1A_ |
| Description: | Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta |
| Matching Structure (courtesy of the PDB): |
|
