| Protein: | UME6 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 836 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UME6.
| Description | E-value | Query Range |
Subject Range |
|
|
1151.0 | [0..1] | [836..1] |
|
|
143.0 | [0..194] | [836..170] |
|
|
128.0 | [0..661] | [814..19] |
|
|
125.0 | [0..652] | [832..50] |
|
|
121.0 | [0..480] | [836..230] |
|
|
116.0 | [0..651] | [809..163] |
|
Region A: Residues: [1-251] |
1 11 21 31 41 51
| | | | | |
1 MLDKARSQSK HMDESNAAAS LLSMETTANN HHYLHNKTSR ATLMNSSQDG KKHAEDEVSD 60
61 GANSRHPTIS SASIESLKTT YDENPLLSIM KSTCAPNNTP VHTPSGSPSL KVQSGGDIKD 120
121 DPKENDTTTT TNTTLQDRRD SDNAVHAAAS PLAPSNTPSD PKSLCNGHVA QATDPQISGA 180
181 IQPQYTATNE DVFPYSSTST NSNTATTTIV AGAKKKIHLP PPQAPAVSSP GTTAAGSGAG 240
241 TGSGIRSRTG S
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [252-483] |
1 11 21 31 41 51
| | | | | |
1 DLPLIITSAN KNNGKTTNSP MSILSRNNST NNNDNNSIQS SDSRESSNNN EIGGYLRGGT 60
61 KRGGSPSNDS QVQHNVHDDQ CAVGVAPRNF YFNKDREITD PNVKLDENES KINISFWLNS 120
121 KYRDEAYSLN ESSSNNASSN TDTPTNSRHA NTSSSITSRN NFQHFRFNQI PSQPPTSASS 180
181 FTSTNNNNPQ RNNINRGEDP FATSSRPSTG FFYGDLPNRN NRNSPFHTNE QY
|
| Detection Method: | |
| Confidence: | 14.37 |
| Match: | |
| Description: | No description for 1je5A was found. |
|
Region A: Residues: [484-619] |
1 11 21 31 41 51
| | | | | |
1 IPPPPPKYIN SKLDGLRSRL LLGPNSASSS TKLDDDLGTA AAVLSNMRSS PYRTHDKPIS 60
61 NVNDMNNTNA LGVPASRPHS SSFPSKGVLR PILLRIHNSE QQPIFESNNS TAVFDEDQDQ 120
121 NQDLSPYHLN LNSKKV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.401 | a.24.1 | Apolipoprotein |
| View | Download | 0.401 | a.24.1 | Apolipoprotein |
| View | Download | 0.301 | d.21.1 | Diaminopimelate epimerase-like |
| View | Download | 0.301 | d.21.1 | Diaminopimelate epimerase-like |
| View | Download | 0.299 | a.118.8 | TPR-like |
| View | Download | 0.299 | a.118.8 | TPR-like |
| View | Download | 0.269 | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.240 | d.110.4 | SNARE-like |
| View | Download | 0.240 | d.110.4 | SNARE-like |
|
Region A: Residues: [620-759] |
1 11 21 31 41 51
| | | | | |
1 LDPTFESRTR QVTWNKNGKR IDRRLSAPEQ QQQLEVPPLK KSRRSVGNAR VASQTNSDYN 60
61 SLGESSTSSA PSSPSLKASS GLAYTADYPN ATSPDFAKSK GKNVKPKAKS KAKQSSKKRP 120
121 NNTTSKSKAN NSQESNNATS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.241 | N/A | N/A | c.23.1 | CheY-like |
|
Region A: Residues: [760-836] |
1 11 21 31 41 51
| | | | | |
1 STSQGTRSRT GCWICRLRKK KCTEERPHCF NCERLKLDCH YDAFKPDFVS DPKKKQMKLE 60
61 EIKKKTKEAK RRAMKKK
|
| Detection Method: | |
| Confidence: | 57.917458 |
| Match: | 1qp9A |
| Description: | Hap1 (Cyp1); HAP1 |
Matching Structure (courtesy of the PDB): |
|
