| Protein: | PEX7 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 375 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PEX7.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-87 | [2..374] | [921..1249] |
|
|
3.0E-87 | [2..373] | [1154..1481] |
|
Region A: Residues: [1-375] |
1 11 21 31 41 51
| | | | | |
1 MLRYHMQGFS GYGVQYSPFF DNRLAVAAGS NFGLVGNGKL FILEIDRSGR IVEVNSFLTQ 60
61 DCLFDLAWNE SHENQVLVAQ GDGTLRLFDT TFKEFPIAIF KEHEREVFSC NWNLVNRQNF 120
121 LSSSWDGSIK IWSPLRKQSL MTLTPRPLEI TKMVDPLNAI ILKKKSFTGI SKNRNCVYQA 180
181 QFSPHDQNLV LSCSGNSYAS LFDIRLPSGK NQNNFLVHSG LEALTCDFNK YRPYVVATGG 240
241 VDNAIRIWDI RMLNKNESAT IKRTVPGQLH NSSCINEIPN AHGLAIRKVT WSPHHSNILM 300
301 SASYDMTCRI WRDLSNDGAK ETYKTNSTDA TKGSIFNFTQ HSEFVFGADW SLWGKPGYVA 360
361 STAWDGNLFV WNGLG
|
| Detection Method: |  |
| Confidence: | 58.0 |
| Match: | 1gg2B_ |
| Description: | beta1-subunit of the signal-transducing G protein heterotrimer |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peroxisome targeting sequence binding | 2.43196533618619 | bayes_pls_golite062009 |
| binding | 2.2778252170547 | bayes_pls_golite062009 |
| peroxisome matrix targeting signal-2 binding | 1.26984584070766 | bayes_pls_golite062009 |
| protein binding | 1.24173112731149 | bayes_pls_golite062009 |
| nucleic acid binding | 0.520265606469501 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.518364053507325 | bayes_pls_golite062009 |
| 0.45054027253231 | bayes_pls_golite062009 | |
| cytoskeletal protein binding | 0.359536347486199 | bayes_pls_golite062009 |
| snoRNA binding | 0.283655461357951 | bayes_pls_golite062009 |
| transcription regulator activity | 0.261490211382488 | bayes_pls_golite062009 |
