| Protein: | SAC6 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 642 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SAC6.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..642] | [1..642] |
|
|
0.0 | [11..638] | [4..620] |
|
|
0.0 | [11..638] | [7..623] |
|
|
0.0 | [11..638] | [4..620] |
|
|
0.0 | [11..638] | [4..620] |
|
Region A: Residues: [1-121] |
1 11 21 31 41 51
| | | | | |
1 MNIVKLQRKF PILTQEDLFS TIEKFRAIDL DDKGWVEKQQ ALEAVSKDGD ATYDEARETL 60
61 KHVGVDASGR VELDDYVGLV AKLRESKTGA APQTTFNVAP NSTPIVSTAA TGLQHKGKGT 120
121 Q
|
| Detection Method: |  |
| Confidence: | 45.045757 |
| Match: | 1a29__ |
| Description: | Calmodulin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 3.96919556235483 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 3.49668552859347 | bayes_pls_golite062009 |
| structural constituent of muscle | 3.12414907235012 | bayes_pls_golite062009 |
| microfilament motor activity | 2.9702957313812 | bayes_pls_golite062009 |
| binding | 2.74623080162785 | bayes_pls_golite062009 |
| motor activity | 2.57627414053278 | bayes_pls_golite062009 |
| actin filament binding | 2.35534489389161 | bayes_pls_golite062009 |
| myosin binding | 2.34125070430971 | bayes_pls_golite062009 |
| actin-dependent ATPase activity | 2.06646671333275 | bayes_pls_golite062009 |
| calcium ion binding | 1.40919295397643 | bayes_pls_golite062009 |
| ion binding | 1.36376383271837 | bayes_pls_golite062009 |
| metal ion binding | 1.34827363853601 | bayes_pls_golite062009 |
| cation binding | 1.34827363853601 | bayes_pls_golite062009 |
| protein binding | 1.16246005294206 | bayes_pls_golite062009 |
| transporter activity | 1.15928534291452 | bayes_pls_golite062009 |
| actin monomer binding | 0.9954841049256 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.945691505472547 | bayes_pls_golite062009 |
| transcription regulator activity | 0.841197898920128 | bayes_pls_golite062009 |
| structural molecule activity | 0.800850121197479 | bayes_pls_golite062009 |
| S100 beta binding | 0.761814775111873 | bayes_pls_golite062009 |
| tubulin binding | 0.710693016758742 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.693724160233023 | bayes_pls_golite062009 |
| myosin heavy chain binding | 0.61866037435065 | bayes_pls_golite062009 |
| nucleic acid binding | 0.582813108431922 | bayes_pls_golite062009 |
| DNA binding | 0.50926539916695 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.45412801027969 | bayes_pls_golite062009 |
| myosin II binding | 0.311147527050891 | bayes_pls_golite062009 |
| microtubule binding | 0.278596514315141 | bayes_pls_golite062009 |
| molecular transducer activity | 0.267701820661496 | bayes_pls_golite062009 |
| signal transducer activity | 0.267701820661496 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.246383459363256 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.193201281459889 | bayes_pls_golite062009 |
| transcription repressor activity | 0.168674124705245 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.116648335890738 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.0305250212662123 | bayes_pls_golite062009 |
|
Region A: Residues: [122-261] |
1 11 21 31 41 51
| | | | | |
1 AKIIVAGSQT GTTHTINEEE RREFTKHINS VLAGDQDIGD LLPFPTDTFQ LFDECRDGLV 60
61 LSKLINDSVP DTIDTRVLNW PKKGKELNNF QASENANIVI NSAKAIGCVV VNVHSEDIIE 120
121 GREHLILGLI WQIIRRGLLS
|
| Detection Method: | |
| Confidence: | 693.450636 |
| Match: | 1aoa__ |
| Description: | N-terminal actin-crosslinking domain from fimbrin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 7.50245214720686 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 6.48140000563569 | bayes_pls_golite062009 |
| actin filament binding | 5.47084878097979 | bayes_pls_golite062009 |
| tubulin binding | 4.22039137964246 | bayes_pls_golite062009 |
| microtubule binding | 4.15537672860167 | bayes_pls_golite062009 |
| binding | 2.8655705697659 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 2.57886434162184 | bayes_pls_golite062009 |
| protein binding | 2.36488136094907 | bayes_pls_golite062009 |
| microtubule plus-end binding | 2.0465241878708 | bayes_pls_golite062009 |
| structural constituent of muscle | 1.32485442580942 | bayes_pls_golite062009 |
| structural molecule activity | 1.00964022808548 | bayes_pls_golite062009 |
|
Region A: Residues: [262-391] |
1 11 21 31 41 51
| | | | | |
1 KIDIKLHPEL YRLLEDDETL EQFLRLPPEQ ILLRWFNYHL KQANWNRRVT NFSKDVSDGE 60
61 NYTILLNQLD PALCSKAPLQ TTDLMERAEQ VLQNAEKLDC RKYLTPSSLV AGNPKLNLAF 120
121 VAHLFNTHPG
|
| Detection Method: | |
| Confidence: | 693.450636 |
| Match: | 1aoa__ |
| Description: | N-terminal actin-crosslinking domain from fimbrin |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [392-528] |
1 11 21 31 41 51
| | | | | |
1 LEPIQEEEKP EIEEFDAEGE REARVFTLWL NSLDVDPPVI SLFDDLKDGL ILLQAYEKVM 60
61 PGAVDFKHVN KRPASGAEIS RFKALENTNY AVDLGRAKGF SLVGIEGSDI VDGNKLLTLG 120
121 LVWQLMRRNI SITMKTL
|
| Detection Method: | |
| Confidence: | 6.045757 |
| Match: | 1g8xA_ |
| Description: | Genetically engineered molecular motor |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [529-642] |
1 11 21 31 41 51
| | | | | |
1 SSSGRDMSDS QILKWAQDQV TKGGKNSTIR SFKDQALSNA HFLLDVLNGI APGYVDYDLV 60
61 TPGNTEEERY ANARLAISIA RKLGALIWLV PEDINEVRAR LIITFIASLM TLNK
|
| Detection Method: | |
| Confidence: | 14.99 |
| Match: | 1bkrA |
| Description: | beta-spectrin |
Matching Structure (courtesy of the PDB): |
|
