Protein: | TMS1 |
Organism: | Saccharomyces cerevisiae |
Length: | 473 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TMS1.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..473] | [1..473] |
|
0.0 | [1..466] | [1..470] |
|
0.0 | [1..466] | [1..450] |
|
0.0 | [1..466] | [5..454] |
|
0.0 | [1..466] | [1..462] |
Region A: Residues: [1-473] |
1 11 21 31 41 51 | | | | | | 1 MGAVISLPVS MAGSFVASCF GGCCSNLVTK TASSLGSSSL GTRLLYAVWL LLNSLISWVS 60 61 YSANKSILWP GKTCTGTGEC GFFTVHRLNF ALGCLHLILA LVLTGVKSTN DVRAALQNSW 120 121 WSLKFILYLC LIVLSFVIPN DFYIFFSKWV SVPSGAIFIL VGLILLVDFA HEWAETCISH 180 181 VESEDEDSSF WQRFLVLGTT SMYTASIIMT VVMYVMFCHQ QCNMNQTAVT VNLILTVITL 240 241 VLSVNPKIQE ANPKSGLAQS SMVSVYCTYL TMSAMSSEPD DKMCNPLVRS SGTRKFSIIL 300 301 GSLFTFIAIA YTTTRAAANS AFQGTNTNGA IYLGNDIEYE GLGGQTRNQL RYEAIKQAVE 360 361 EGSLPESALY DTAWLGTSSP TGAMDNQNDD ERTGTKYNYT LFHVIFFLAT QWIAILLTIN 420 421 VTQDDVGDFI PVGRTYFYSW VKIVSAWICY ALYGWTVVAP AIMPDRFDYE NYY |
Detection Method: | ![]() |
Confidence: | 283.387216 |
Match: | PF03348 |
Description: | TMS membrane protein/tumour differentially expressed protein (TDE) |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.