| Protein: | LYS14 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 790 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LYS14.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..790] | [1..790] |
|
|
1.0E-84 | [140..545] | [2..338] |
|
|
4.0E-52 | [4..423] | [679..1115] |
|
|
2.0E-35 | [5..403] | [767..1176] |
|
|
8.0E-35 | [100..437] | [3..347] |
|
|
9.0E-35 | [10..353] | [1498..1887] |
|
Region A: Residues: [1-152] |
1 11 21 31 41 51
| | | | | |
1 MFESVNLDEN SPEDRELAKV LSPPGSYLSP ASLDSGSSFT NSGTSTSCFE PKNNLPSLSF 60
61 LNARAGSLGG IFNHKQMTSP SNSNIGGENV ESTTSSNDGS NENAGHPTTS EQDQNADHPT 120
121 ISQADDNGHS SLTPNPAVTS TVTDKKGNTV KR
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [153-233] |
1 11 21 31 41 51
| | | | | |
1 KYSRNGCSEC KRRRMKCDET KPTCWQCARL NRQCVYVLNP KNKKRRTSNA QRVKEFRKHS 60
61 TSLDNDHNNA RKRQHSSCKA E
|
| Detection Method: | |
| Confidence: | 5.619789 |
| Match: | PF00172 |
| Description: | Fungal Zn(2)-Cys(6) binuclear cluster domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| transcription regulator activity | 4.56444258780502 | bayes_pls_golite062009 |
| DNA binding | 4.26146437716972 | bayes_pls_golite062009 |
| nucleic acid binding | 4.17369933547911 | bayes_pls_golite062009 |
| transcription factor activity | 3.049435548132 | bayes_pls_golite062009 |
| binding | 2.91929847152301 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.03201524223606 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.87955444697212 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.86200506906385 | bayes_pls_golite062009 |
| transcription activator activity | 0.915626626047549 | bayes_pls_golite062009 |
|
Region A: Residues: [234-790] |
1 11 21 31 41 51
| | | | | |
1 KKKKVRQNLS EDTTDPKPIT DNGKNVPLDE IESLEIPNLD LTTTMNGYDV NLLMQNLNDM 60
61 VNMKLHDSYL LNEELKGLDL PDLDIPELLP ASNVNSSVPI SFLVNNVITF NTKLSSFKLG 120
121 GIHDKYLKIF YYDCLDSIAP FFQNQGNPLR DILLSFAKNE AYLLSSILAT GASIAYRKSN 180
181 NLEDERNYCA YLSHCLSLLG EQFKNESNVL NRIEPIILTV IMLAWDCIYS MNSQWRSHLK 240
241 GVTDLFKKIN AGNSSKVLNV AKCWFKVMET FASISTVFGG SLIDNNDLDA IFDPYDYQYV 300
301 DSLKFLNIMT PLNEFNLLRG HKEDFDLVIK EVFKSLNTIR STEKNYFSKE EGLFTKKLDY 360
361 LLLSSQTSSE KSKDQISYFN TQKILVEIDK QLDYEFIDKS GIIPSDNQSH PRISNIHDNA 420
421 IDMVTLKNGE EVAISWYDIS HQTQVLSFLL IVLLKLLGMP KESSTIQQVV KKIMSFFKFL 480
481 DSDSPPQNSR TCYSNFAVLI AGLNAMDEET RAIVKRYYKI NGGKFQKLTE HNLNRLEKVW 540
541 YGKNQNYRLE EQDVLTW
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [355-553] |
1 11 21 31 41 51
| | | | | |
1 IHDKYLKIFY YDCLDSIAPF FQNQGNPLRD ILLSFAKNEA YLLSSILATG ASIAYRKSNN 60
61 LEDERNYCAY LSHCLSLLGE QFKNESNVLN RIEPIILTVI MLAWDCIYSM NSQWRSHLKG 120
121 VTDLFKKINA GNSSKVLNVA KCWFKVMETF ASISTVFGGS LIDNNDLDAI FDPYDYQYVD 180
181 SLKFLNIMTP LNEFNLLRG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [554-639] |
1 11 21 31 41 51
| | | | | |
1 HKEDFDLVIK EVFKSLNTIR STEKNYFSKE EGLFTKKLDY LLLSSQTSSE KSKDQISYFN 60
61 TQKILVEIDK QLDYEFIDKS GIIPSD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [640-790] |
1 11 21 31 41 51
| | | | | |
1 NQSHPRISNI HDNAIDMVTL KNGEEVAISW YDISHQTQVL SFLLIVLLKL LGMPKESSTI 60
61 QQVVKKIMSF FKFLDSDSPP QNSRTCYSNF AVLIAGLNAM DEETRAIVKR YYKINGGKFQ 120
121 KLTEHNLNRL EKVWYGKNQN YRLEEQDVLT W
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
