| Protein: | RAD28 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 506 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RAD28.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [8..452] | [835..1257] |
|
|
0.0 | [9..505] | [1027..1486] |
|
Region A: Residues: [1-317] |
1 11 21 31 41 51
| | | | | |
1 MDPFLEFRVG NISLNEFYRR TIQSEFERIL EDPLSNMKNY RFSKQSNYST KEKTPLSIGV 60
61 NCLDIDDTGQ VLLGGGDDGS LSIWGLDESL HRNDEGEQEL INKRLNYIKR QPHQSDDEPA 120
121 QIMGYKNKRT RINDNNTMRL VHSFQTQRNK YRMYRQSSAA VPVQRSHISN KTDSPIGFSE 180
181 TLSETDSEAS ISHHKYGITT LKWYKADNGM FFTGSNDKTV KIWDTNRFEA VQDINLGYKI 240
241 NQIDNNVVDD SSLLVVASED YYPRLIDLRT MNSGVTALGM GNQTRMQSEI LCCKFNPVRE 300
301 QIIACGDMEG GVKLWDL
|
| Detection Method: |  |
| Confidence: | 25.69897 |
| Match: | 1gxrA_ |
| Description: | Groucho/tle1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [318-405] |
1 11 21 31 41 51
| | | | | |
1 RMRNRLYSEL KRNKNRFKTI NNDDNDDQSD VYFSSNQSKA HLRCCSDIVW NSEGSELCSV 60
61 GMDGKLNVWR PFTEILQPEG LASYSQLG
|
| Detection Method: | |
| Confidence: | 70.30103 |
| Match: | 1gg2B_ |
| Description: | beta1-subunit of the signal-transducing G protein heterotrimer |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [406-506] |
1 11 21 31 41 51
| | | | | |
1 TQDLSRIKYK KRVSRRLLWF DKFLLCITDN GEVEIYNTEE KKLWNKLEYP MVNQVKKNQA 60
61 SHCQFSSMIV QTNIMNSVGL KLFFGTNNNT VSDGGSIFEC S
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
