| Protein: | COS7 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 383 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COS7.
| Description | E-value | Query Range |
Subject Range |
|
|
604.0 | [0..1] | [383..1] |
|
Region A: Residues: [1-61] |
1 11 21 31 41 51
| | | | | |
1 MKENEVKDEK SVDVLSFKQL ESQKIVLPQD LFRSSFTWFC YEIYKSLAFR IWMLLWLPLS 60
61 V
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.477 | N/A | N/A | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.458 | N/A | N/A | a.60.2 | RuvA domain 2-like |
| View | Download | 0.426 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.405 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.400 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.358 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.357 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.354 | N/A | N/A | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
|
Region A: Residues: [62-173] |
1 11 21 31 41 51
| | | | | |
1 WWKLSNNCIY PLIVSLLVLF LGPIFVLVIC GLSRKRSLSK QLIQFCKEIT ENTPSSDPHD 60
61 WEVVVANLNS YLYENKAWNT KNFFFNATDC EKMFRTTVLE PFSLKKDKAA KV
|
| Detection Method: | |
| Confidence: | 48.39794 |
| Match: | PF00674 |
| Description: | DUP family |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.934 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.856 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.856 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.823 | N/A | N/A | a.216.1 | Description not found. |
| View | Download | 0.794 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.780 | N/A | N/A | a.19.1 | Fertilization protein |
| View | Download | 0.780 | N/A | N/A | a.19.1 | Fertilization protein |
| View | Download | 0.766 | N/A | N/A | a.29.13 | Description not found. |
| View | Download | 0.707 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.642 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
|
Region A: Residues: [174-244] |
1 11 21 31 41 51
| | | | | |
1 KSFKDSVPYI EEALQVYATG FDKQWKLFIT EKSWSPVGLE DVQLPKDIHR SKLTWFLKRI 60
61 FTIYSLPLWL A
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.790 | a.2.17 | Description not found. |
| View | Download | 0.772 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.717 | a.2.7 | tRNA-binding arm |
| View | Download | 0.717 | a.2.7 | tRNA-binding arm |
| View | Download | 0.711 | d.52.1 | Alpha-lytic protease prodomain |
| View | Download | 0.700 | d.52.1 | Alpha-lytic protease prodomain |
| View | Download | 0.658 | d.58.17 | Metal-binding domain |
| View | Download | 0.621 | d.58.17 | Metal-binding domain |
| View | Download | 0.621 | d.58.17 | Metal-binding domain |
| View | Download | 0.595 | d.58.17 | Metal-binding domain |
|
Region A: Residues: [245-383] |
1 11 21 31 41 51
| | | | | |
1 FLNCICVSQH FCLAFRILCP GLFFLMMVWL FQNMRTTALL VKMEHKMQFL LTIINEQESG 60
61 ANGWDEIARK MNRYLFEKKA WKNEEFFFDG IDCEWFFSHF FYRLLSAKKS MWLLPLNVEL 120
121 WPYIKEAQLS RNEESLMKK
|
| Detection Method: | |
| Confidence: | 59.886057 |
| Match: | PF00674 |
| Description: | DUP family |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.554 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.406 | N/A | N/A | a.70.2 | Description not found. |
| View | Download | 0.297 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.288 | N/A | N/A | d.162.1 | LDH C-terminal domain-like |
| View | Download | 0.284 | N/A | N/A | f.39.1 | Description not found. |
| View | Download | 0.283 | N/A | N/A | d.162.1 | LDH C-terminal domain-like |
| View | Download | 0.280 | N/A | N/A | d.162.1 | LDH C-terminal domain-like |
| View | Download | 0.250 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.240 | N/A | N/A | a.1.1 | Globin-like |
