Protein: | SEC31 |
Organism: | Saccharomyces cerevisiae |
Length: | 1273 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SEC31.
Description | E-value | Query Range |
Subject Range |
|
927.0 | [0..1] | [1273..1] |
|
674.0 | [0..1] | [650..887] |
|
640.0 | [0..6] | [647..548] |
|
625.0 | [0..9] | [646..1035] |
|
620.0 | [0..2] | [1271..10] |
|
620.0 | [0..2] | [1271..1] |
Region A: Residues: [1-373] |
1 11 21 31 41 51 | | | | | | 1 MVKLAEFSRT ATFAWSHDKI PLLVSGTVSG TVDANFSTDS SLELWSLLAA DSEKPIASLQ 60 61 VDSKFNDLDW SHNNKIIAGA LDNGSLELYS TNEANNAINS MARFSNHSSS VKTVKFNAKQ 120 121 DNVLASGGNN GEIFIWDMNK CTESPSNYTP LTPGQSMSSV DEVISLAWNQ SLAHVFASAG 180 181 SSNFASIWDL KAKKEVIHLS YTSPNSGIKQ QLSVVEWHPK NSTRVATATG SDNDPSILIW 240 241 DLRNANTPLQ TLNQGHQKGI LSLDWCHQDE HLLLSSGRDN TVLLWNPESA EQLSQFPARG 300 301 NWCFKTKFAP EAPDLFACAS FDNKIEVQTL QNLTNTLDEQ ETETKQQESE TDFWNNVSRE 360 361 ESKEKPSVFH LQA |
Detection Method: | |
Confidence: | 135.626727 |
Match: | 1gg2B |
Description: | beta1-subunit of the signal-transducing G protein heterotrimer |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [374-506] |
1 11 21 31 41 51 | | | | | | 1 PTWYGEPSPA AHWAFGGKLV QITPDGKGVS ITNPKISGLE SNTTLSEALK TKDFKPLINQ 60 61 RLVKVIDDVN EEDWNLLEKL SMDGTEEFLK EALAFDNDES DAQDDANNEK EDDGEEFFQQ 120 121 IETNFQPEGD FSL |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [507-693] |
1 11 21 31 41 51 | | | | | | 1 SGNIEQTISK NLVSGNIKSA VKNSLENDLL MEAMVIALDS NNERLKESVK NAYFAKYGSK 60 61 SSLSRILYSI SKREVDDLVE NLDVSQWKFI SKAIQNLYPN DIAQRNEMLI KLGDRLKENG 120 121 HRQDSLTLYL AAGSLDKVAS IWLSEFPDLE DKLKKDNKTI YEAHSECLTE FIERFTVFSN 180 181 FINGSST |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [694-902] |
1 11 21 31 41 51 | | | | | | 1 INNEQLIAKF LEFINLTTST GNFELATEFL NSLPSDNEEV KTEKARVLIA SGKSLPAQNP 60 61 ATATTSKAKY TNAKTNKNVP VLPTPGMPST TSIPSMQAPF YGMTPGASAN ALPPKPYVPA 120 121 TTTSAPVHTE GKYAPPSQPS MASPFVNKTN SSTRLNSFAP PPNPYATATV PATNVSTTSI 180 181 PQNTFAPIQP GMPIMGDYNA QSSSIPSQP |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [903-1001] |
1 11 21 31 41 51 | | | | | | 1 PINAVSGQTP HLNRKANDGW NDLPLKVKEK PSRAKAVSVA PPNILSTPTP LNGIPANAAS 60 61 TMPPPPLSRA PSSVSMVSPP PLHKNSRVPS LVATSESPR |
Region A: Residues: [1002-1273] |
1 11 21 31 41 51 | | | | | | 1 ASISNPYAPP QSSQQFPIGT ISTANQTSNT AQVASSNPYA PPPQQRVATP LSGGVPPAPL 60 61 PKASNPYAPT ATTQPNGSSY PPTGPYTNNH TMTSPPPVFN KPPTGPPPIS MKKRSNKLAS 120 121 IEQNPSQGAT YPPTLSSSAS PLQPSQPPTL ASQVNTSAEN VSHEIPADQQ PIVDFLKEEL 180 181 ARVTPLTPKE YSKQLKDCDK RLKILFYHLE KQDLLTQPTI DCLHDLVALM KEKKYKEAMV 240 241 IHANIATNHA QEGGNWLTGV KRLIGIAEAT LN |