| Protein: | SEC31 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1273 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SEC31.
| Description | E-value | Query Range |
Subject Range |
|
|
927.0 | [0..1] | [1273..1] |
|
|
674.0 | [0..1] | [650..887] |
|
|
640.0 | [0..6] | [647..548] |
|
|
625.0 | [0..9] | [646..1035] |
|
|
620.0 | [0..2] | [1271..10] |
|
|
620.0 | [0..2] | [1271..1] |
|
Region A: Residues: [1-373] |
1 11 21 31 41 51
| | | | | |
1 MVKLAEFSRT ATFAWSHDKI PLLVSGTVSG TVDANFSTDS SLELWSLLAA DSEKPIASLQ 60
61 VDSKFNDLDW SHNNKIIAGA LDNGSLELYS TNEANNAINS MARFSNHSSS VKTVKFNAKQ 120
121 DNVLASGGNN GEIFIWDMNK CTESPSNYTP LTPGQSMSSV DEVISLAWNQ SLAHVFASAG 180
181 SSNFASIWDL KAKKEVIHLS YTSPNSGIKQ QLSVVEWHPK NSTRVATATG SDNDPSILIW 240
241 DLRNANTPLQ TLNQGHQKGI LSLDWCHQDE HLLLSSGRDN TVLLWNPESA EQLSQFPARG 300
301 NWCFKTKFAP EAPDLFACAS FDNKIEVQTL QNLTNTLDEQ ETETKQQESE TDFWNNVSRE 360
361 ESKEKPSVFH LQA
|
| Detection Method: |  |
| Confidence: | 135.626727 |
| Match: | 1gg2B |
| Description: | beta1-subunit of the signal-transducing G protein heterotrimer |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [374-506] |
1 11 21 31 41 51
| | | | | |
1 PTWYGEPSPA AHWAFGGKLV QITPDGKGVS ITNPKISGLE SNTTLSEALK TKDFKPLINQ 60
61 RLVKVIDDVN EEDWNLLEKL SMDGTEEFLK EALAFDNDES DAQDDANNEK EDDGEEFFQQ 120
121 IETNFQPEGD FSL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.301 | N/A | N/A | a.253.1 | Description not found. |
| View | Download | 0.293 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.266 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.263 | N/A | N/A | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
| View | Download | 0.263 | N/A | N/A | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
| View | Download | 0.233 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.229 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.220 | N/A | N/A | a.118.9 | ENTH/VHS domain |
|
Region A: Residues: [507-693] |
1 11 21 31 41 51
| | | | | |
1 SGNIEQTISK NLVSGNIKSA VKNSLENDLL MEAMVIALDS NNERLKESVK NAYFAKYGSK 60
61 SSLSRILYSI SKREVDDLVE NLDVSQWKFI SKAIQNLYPN DIAQRNEMLI KLGDRLKENG 120
121 HRQDSLTLYL AAGSLDKVAS IWLSEFPDLE DKLKKDNKTI YEAHSECLTE FIERFTVFSN 180
181 FINGSST
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.413 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.313 | N/A | N/A | f.1.3 | delta-Endotoxin (insectocide), N-terminal domain |
| View | Download | 0.300 | N/A | N/A | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.292 | N/A | N/A | a.118.19 | Description not found. |
| View | Download | 0.270 | N/A | N/A | a.191.1 | Description not found. |
| View | Download | 0.263 | N/A | N/A | c.45.1 | (Phosphotyrosine protein) phosphatases II |
| View | Download | 0.255 | N/A | N/A | f.1.3 | delta-Endotoxin (insectocide), N-terminal domain |
| View | Download | 0.244 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.229 | N/A | N/A | a.118.15 | Aconitase B, N-terminal domain |
|
Region A: Residues: [694-902] |
1 11 21 31 41 51
| | | | | |
1 INNEQLIAKF LEFINLTTST GNFELATEFL NSLPSDNEEV KTEKARVLIA SGKSLPAQNP 60
61 ATATTSKAKY TNAKTNKNVP VLPTPGMPST TSIPSMQAPF YGMTPGASAN ALPPKPYVPA 120
121 TTTSAPVHTE GKYAPPSQPS MASPFVNKTN SSTRLNSFAP PPNPYATATV PATNVSTTSI 180
181 PQNTFAPIQP GMPIMGDYNA QSSSIPSQP
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [903-1001] |
1 11 21 31 41 51
| | | | | |
1 PINAVSGQTP HLNRKANDGW NDLPLKVKEK PSRAKAVSVA PPNILSTPTP LNGIPANAAS 60
61 TMPPPPLSRA PSSVSMVSPP PLHKNSRVPS LVATSESPR
|
| Detection Method: | |
| Confidence: | 11.07 |
| Match: | |
| Description: | No description for 1deqA was found. |
|
Region A: Residues: [1002-1273] |
1 11 21 31 41 51
| | | | | |
1 ASISNPYAPP QSSQQFPIGT ISTANQTSNT AQVASSNPYA PPPQQRVATP LSGGVPPAPL 60
61 PKASNPYAPT ATTQPNGSSY PPTGPYTNNH TMTSPPPVFN KPPTGPPPIS MKKRSNKLAS 120
121 IEQNPSQGAT YPPTLSSSAS PLQPSQPPTL ASQVNTSAEN VSHEIPADQQ PIVDFLKEEL 180
181 ARVTPLTPKE YSKQLKDCDK RLKILFYHLE KQDLLTQPTI DCLHDLVALM KEKKYKEAMV 240
241 IHANIATNHA QEGGNWLTGV KRLIGIAEAT LN
|
| Detection Method: | |
| Confidence: | 8.4 |
| Match: | |
| Description: | No description for 1ei3A was found. |
