Protein: | SEC31 |
Organism: | Saccharomyces cerevisiae |
Length: | 1273 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SEC31.
Description | E-value | Query Range |
Subject Range |
|
927.0 | [0..1] | [1273..1] |
|
674.0 | [0..1] | [650..887] |
|
640.0 | [0..6] | [647..548] |
|
625.0 | [0..9] | [646..1035] |
|
620.0 | [0..2] | [1271..10] |
|
620.0 | [0..2] | [1271..1] |
Region A: Residues: [1-373] |
1 11 21 31 41 51 | | | | | | 1 MVKLAEFSRT ATFAWSHDKI PLLVSGTVSG TVDANFSTDS SLELWSLLAA DSEKPIASLQ 60 61 VDSKFNDLDW SHNNKIIAGA LDNGSLELYS TNEANNAINS MARFSNHSSS VKTVKFNAKQ 120 121 DNVLASGGNN GEIFIWDMNK CTESPSNYTP LTPGQSMSSV DEVISLAWNQ SLAHVFASAG 180 181 SSNFASIWDL KAKKEVIHLS YTSPNSGIKQ QLSVVEWHPK NSTRVATATG SDNDPSILIW 240 241 DLRNANTPLQ TLNQGHQKGI LSLDWCHQDE HLLLSSGRDN TVLLWNPESA EQLSQFPARG 300 301 NWCFKTKFAP EAPDLFACAS FDNKIEVQTL QNLTNTLDEQ ETETKQQESE TDFWNNVSRE 360 361 ESKEKPSVFH LQA |
Detection Method: | |
Confidence: | 135.626727 |
Match: | 1gg2B |
Description: | beta1-subunit of the signal-transducing G protein heterotrimer |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [374-506] |
1 11 21 31 41 51 | | | | | | 1 PTWYGEPSPA AHWAFGGKLV QITPDGKGVS ITNPKISGLE SNTTLSEALK TKDFKPLINQ 60 61 RLVKVIDDVN EEDWNLLEKL SMDGTEEFLK EALAFDNDES DAQDDANNEK EDDGEEFFQQ 120 121 IETNFQPEGD FSL |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.301 | N/A | N/A | a.253.1 | Description not found. |
View | Download | 0.293 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
View | Download | 0.266 | N/A | N/A | a.118.8 | TPR-like |
View | Download | 0.263 | N/A | N/A | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
View | Download | 0.263 | N/A | N/A | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
View | Download | 0.233 | N/A | N/A | a.118.9 | ENTH/VHS domain |
View | Download | 0.229 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
View | Download | 0.220 | N/A | N/A | a.118.9 | ENTH/VHS domain |
Region A: Residues: [507-693] |
1 11 21 31 41 51 | | | | | | 1 SGNIEQTISK NLVSGNIKSA VKNSLENDLL MEAMVIALDS NNERLKESVK NAYFAKYGSK 60 61 SSLSRILYSI SKREVDDLVE NLDVSQWKFI SKAIQNLYPN DIAQRNEMLI KLGDRLKENG 120 121 HRQDSLTLYL AAGSLDKVAS IWLSEFPDLE DKLKKDNKTI YEAHSECLTE FIERFTVFSN 180 181 FINGSST |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.413 | N/A | N/A | a.118.1 | ARM repeat |
View | Download | 0.313 | N/A | N/A | f.1.3 | delta-Endotoxin (insectocide), N-terminal domain |
View | Download | 0.300 | N/A | N/A | d.54.1 | Enolase N-terminal domain-like |
View | Download | 0.292 | N/A | N/A | a.118.19 | Description not found. |
View | Download | 0.270 | N/A | N/A | a.191.1 | Description not found. |
View | Download | 0.263 | N/A | N/A | c.45.1 | (Phosphotyrosine protein) phosphatases II |
View | Download | 0.255 | N/A | N/A | f.1.3 | delta-Endotoxin (insectocide), N-terminal domain |
View | Download | 0.244 | N/A | N/A | a.118.1 | ARM repeat |
View | Download | 0.229 | N/A | N/A | a.118.15 | Aconitase B, N-terminal domain |
Region A: Residues: [694-902] |
1 11 21 31 41 51 | | | | | | 1 INNEQLIAKF LEFINLTTST GNFELATEFL NSLPSDNEEV KTEKARVLIA SGKSLPAQNP 60 61 ATATTSKAKY TNAKTNKNVP VLPTPGMPST TSIPSMQAPF YGMTPGASAN ALPPKPYVPA 120 121 TTTSAPVHTE GKYAPPSQPS MASPFVNKTN SSTRLNSFAP PPNPYATATV PATNVSTTSI 180 181 PQNTFAPIQP GMPIMGDYNA QSSSIPSQP |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [903-1001] |
1 11 21 31 41 51 | | | | | | 1 PINAVSGQTP HLNRKANDGW NDLPLKVKEK PSRAKAVSVA PPNILSTPTP LNGIPANAAS 60 61 TMPPPPLSRA PSSVSMVSPP PLHKNSRVPS LVATSESPR |
Region A: Residues: [1002-1273] |
1 11 21 31 41 51 | | | | | | 1 ASISNPYAPP QSSQQFPIGT ISTANQTSNT AQVASSNPYA PPPQQRVATP LSGGVPPAPL 60 61 PKASNPYAPT ATTQPNGSSY PPTGPYTNNH TMTSPPPVFN KPPTGPPPIS MKKRSNKLAS 120 121 IEQNPSQGAT YPPTLSSSAS PLQPSQPPTL ASQVNTSAEN VSHEIPADQQ PIVDFLKEEL 180 181 ARVTPLTPKE YSKQLKDCDK RLKILFYHLE KQDLLTQPTI DCLHDLVALM KEKKYKEAMV 240 241 IHANIATNHA QEGGNWLTGV KRLIGIAEAT LN |