| Protein: | NAT1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 854 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAT1.
| Description | E-value | Query Range |
Subject Range |
|
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0.0 | [1..854] | [1..854] |
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|
0.0 | [17..795] | [7..753] |
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|
0.0 | [17..795] | [7..754] |
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0.0 | [17..795] | [7..735] |
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2.0E-96 | [17..786] | [8..754] |
|
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9.0E-96 | [17..756] | [6..712] |
|
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2.0E-85 | [2..522] | [27..530] |
|
Region A: Residues: [1-173] |
1 11 21 31 41 51
| | | | | |
1 MSRKRSTKPK PAAKIALKKE NDQFLEALKL YEGKQYKKSL KLLDAILKKD GSHVDSLALK 60
61 GLDLYSVGEK DDAASYVANA IRKIEGASAS PICCHVLGIY MRNTKEYKES IKWFTAALNN 120
121 GSTNKQIYRD LATLQSQIGD FKNALVSRKK YWEAFLGYRA NWTSLAVAQD VNG
|
| Detection Method: |  |
| Confidence: | 28.0 |
| Match: | 1fchA_ |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [174-255] |
1 11 21 31 41 51
| | | | | |
1 ERQQAINTLS QFEKLAEGKI SDSEKYEHSE CLMYKNDIMY KAASDNQDKL QNVLKHLNDI 60
61 EPCVFDKFGL LERKATIYMK LG
|
| Detection Method: | |
| Confidence: | 28.0 |
| Match: | 1fchA_ |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [256-342] |
1 11 21 31 41 51
| | | | | |
1 QLKDASIVYR TLIKRNPDNF KYYKLLEVSL GIQGDNKLKK ALYGKLEQFY PRCEPPKFIP 60
61 LTFLQDKEEL SKKLREYVLP QLERGVP
|
| Detection Method: | |
| Confidence: | 28.0 |
| Match: | 1fchA_ |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [343-513] |
1 11 21 31 41 51
| | | | | |
1 ATFSNVKPLY QRRKSKVSPL LEKIVLDYLS GLDPTQDPIP FIWTNYYLSQ HFLFLKDFPK 60
61 AQEYIDAALD HTPTLVEFYI LKARILKHLG LMDTAAGILE EGRQLDLQDR FINCKTVKYF 120
121 LRANNIDKAV EVASLFTKND DSVNGIKDLH LVEASWFIVE QAEAYYRLYL D
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.945 | 0.330 | protein amino acid acetylation | a.118.8 | TPR-like |
| View | Download | 0.831 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.829 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.759 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.747 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.736 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.693 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.685 | N/A | N/A | e.40.1 | Cullin homology domain |
| View | Download | 0.679 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.650 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.645 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.642 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.633 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.627 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.626 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.613 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.611 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.610 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.598 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.598 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.572 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.553 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.533 | N/A | N/A | d.110.2 | GAF domain-like |
| View | Download | 0.530 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.513 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.513 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.498 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.486 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.475 | N/A | N/A | d.110.2 | GAF domain-like |
| View | Download | 0.473 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.471 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.468 | N/A | N/A | d.110.2 | GAF domain-like |
| View | Download | 0.463 | N/A | N/A | d.110.2 | GAF domain-like |
| View | Download | 0.462 | N/A | N/A | a.118.6 | Protein prenylyltransferase |
| View | Download | 0.458 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.452 | N/A | N/A | a.126.1 | Serum albumin-like |
| View | Download | 0.451 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.440 | N/A | N/A | c.45.1 | (Phosphotyrosine protein) phosphatases II |
| View | Download | 0.427 | N/A | N/A | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.417 | N/A | N/A | a.152.1 | Antioxidant defence protein AhpD |
| View | Download | 0.414 | N/A | N/A | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
| View | Download | 0.412 | N/A | N/A | a.118.18 | Cysteine rich protein B (HcpB) |
| View | Download | 0.397 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.394 | N/A | N/A | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.393 | N/A | N/A | a.152.1 | Antioxidant defence protein AhpD |
| View | Download | 0.392 | N/A | N/A | a.102.3 | Chondroitin AC/alginate lyase |
| View | Download | 0.391 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.383 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.382 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.369 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.364 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.355 | N/A | N/A | a.95.1 | Influenza virus matrix protein M1 |
| View | Download | 0.355 | N/A | N/A | a.95.1 | Influenza virus matrix protein M1 |
| View | Download | 0.355 | N/A | N/A | a.95.1 | Influenza virus matrix protein M1 |
| View | Download | 0.347 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.346 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.338 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.336 | N/A | N/A | a.126.1 | Serum albumin-like |
| View | Download | 0.334 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.330 | N/A | N/A | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.327 | N/A | N/A | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.324 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.323 | N/A | N/A | a.126.1 | Serum albumin-like |
| View | Download | 0.316 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.314 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.311 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.308 | N/A | N/A | a.152.1 | Antioxidant defence protein AhpD |
| View | Download | 0.306 | N/A | N/A | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.304 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.301 | N/A | N/A | e.40.1 | Cullin homology domain |
| View | Download | 0.301 | N/A | N/A | a.95.1 | Influenza virus matrix protein M1 |
| View | Download | 0.300 | N/A | N/A | a.126.1 | Serum albumin-like |
| View | Download | 0.299 | N/A | N/A | a.118.18 | Cysteine rich protein B (HcpB) |
| View | Download | 0.296 | N/A | N/A | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.295 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.294 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.293 | N/A | N/A | a.95.1 | Influenza virus matrix protein M1 |
| View | Download | 0.290 | N/A | N/A | d.110.2 | GAF domain-like |
| View | Download | 0.288 | N/A | N/A | a.95.1 | Influenza virus matrix protein M1 |
| View | Download | 0.288 | N/A | N/A | a.118.18 | Cysteine rich protein B (HcpB) |
| View | Download | 0.285 | N/A | N/A | a.118.15 | Aconitase B, N-terminal domain |
| View | Download | 0.278 | N/A | N/A | c.55.4 | Translational machinery components |
| View | Download | 0.277 | N/A | N/A | a.102.5 | Family 10 polysaccharide lyase |
| View | Download | 0.274 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.274 | N/A | N/A | b.45.1 | FMN-binding split barrel |
| View | Download | 0.270 | N/A | N/A | a.102.5 | Family 10 polysaccharide lyase |
| View | Download | 0.268 | N/A | N/A | d.211.1 | Ankyrin repeat |
| View | Download | 0.267 | N/A | N/A | a.118.15 | Aconitase B, N-terminal domain |
| View | Download | 0.265 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.264 | N/A | N/A | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
| View | Download | 0.263 | N/A | N/A | a.152.1 | Antioxidant defence protein AhpD |
| View | Download | 0.261 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.259 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.254 | N/A | N/A | a.118.6 | Protein prenylyltransferase |
| View | Download | 0.250 | N/A | N/A | a.22.1 | Histone-fold |
| View | Download | 0.249 | N/A | N/A | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.247 | N/A | N/A | a.95.1 | Influenza virus matrix protein M1 |
| View | Download | 0.246 | N/A | N/A | c.10.1 | RNI-like |
| View | Download | 0.242 | N/A | N/A | a.152.1 | Antioxidant defence protein AhpD |
| View | Download | 0.239 | N/A | N/A | c.61.1 | PRTase-like |
| View | Download | 0.236 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.234 | N/A | N/A | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
| View | Download | 0.232 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.232 | N/A | N/A | e.40.1 | Cullin homology domain |
| View | Download | 0.231 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.229 | N/A | N/A | a.118.18 | Cysteine rich protein B (HcpB) |
| View | Download | 0.227 | N/A | N/A | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.222 | N/A | N/A | a.95.1 | Influenza virus matrix protein M1 |
| View | Download | 0.221 | N/A | N/A | a.146.1 | Telomeric repeat binding factor (TRF) dimerisation domain |
| View | Download | 0.218 | N/A | N/A | a.97.1 | An anticodon-binding domain of class I aminoacyl-tRNA synthetases |
| View | Download | 0.215 | N/A | N/A | a.23.2 | Diol dehydratase, gamma subunit |
| View | Download | 0.214 | N/A | N/A | a.1.2 | alpha-helical ferredoxin |
| View | Download | 0.213 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.212 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.211 | N/A | N/A | f.1.1 | Colicin |
| View | Download | 0.211 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.209 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.204 | N/A | N/A | a.118.18 | Cysteine rich protein B (HcpB) |
| View | Download | 0.204 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.202 | N/A | N/A | a.152.1 | Antioxidant defence protein AhpD |
| View | Download | 0.201 | N/A | N/A | a.118.6 | Protein prenylyltransferase |
| View | Download | 0.201 | N/A | N/A | a.118.1 | ARM repeat |
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Region A: Residues: [514-579] |
1 11 21 31 41 51
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1 RKKKLDDLAS LKKEVESDKS EQIANDIKEN QWLVRKYKGL ALKRFNAIPK FYKQFEDDQL 60
61 DFHSYC
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.413 | a.4.1 | Homeodomain-like |
| View | Download | 0.433 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.405 | d.39.1 | Dynein light chain 8 (DLC8) |
| View | Download | 0.437 | a.118.14 | FliG |
| View | Download | 0.393 | a.39.4 | Hypothetical protein MTH865 |
| View | Download | 0.371 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.366 | a.118.14 | FliG |
| View | Download | 0.347 | a.4.1 | Homeodomain-like |
| View | Download | 0.328 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.325 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.323 | a.64.1 | Saposin |
| View | Download | 0.310 | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.308 | a.118.14 | FliG |
| View | Download | 0.300 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.275 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.245 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.241 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.216 | a.39.1 | EF-hand |
| View | Download | 0.214 | a.140.4 | Recombination endonuclease VII, C-terminal and dimerization domains |
| View | Download | 0.211 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.210 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.209 | a.28.1 | ACP-like |
| View | Download | 0.207 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.202 | a.3.1 | Cytochrome c |
| View | Download | 0.201 | a.4.1 | Homeodomain-like |
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Region A: Residues: [580-854] |
1 11 21 31 41 51
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1 MRKGTPRAYL EMLEWGKALY TKPMYVRAMK EASKLYFQMH DDRLKRKSDS LDENSDEIQN 60
61 NGQNSSSQKK KAKKEAAAMN KRKETEAKSV AAYPSDQDND VFGEKLIETS TPMEDFATEF 120
121 YNNYSMQVRE DERDYILDFE FNYRIGKLAL CFASLNKFAK RFGTTSGLFG SMAIVLLHAT 180
181 RNDTPFDPIL KKVVTKSLEK EYSENFPLNE ISNNSFDWLN FYQEKFGKND INGLLFLYRY 240
241 RDDVPIGSSN LKEMIISSLS PLEPHSQNEI LQYYL
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
