Protein: | DBP10 |
Organism: | Saccharomyces cerevisiae |
Length: | 995 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DBP10.
Description | E-value | Query Range |
Subject Range |
|
863.0 | [0..58] | [995..48] |
|
841.0 | [0..16] | [994..12] |
|
826.0 | [0..1] | [995..1] |
|
819.0 | [0..59] | [983..148] |
|
815.0 | [0..60] | [988..31] |
|
700.0 | [0..64] | [983..37] |
|
696.0 | [0..64] | [981..37] |
Region A: Residues: [1-99] |
1 11 21 31 41 51 | | | | | | 1 MAGVQKRKRD LEDQDDNGSE EDDIAFDIAN EIALNDSESD ANDSDSEVEA DYGPNDVQDV 60 61 IEYSSDEEEG VNNKKKAENK DIKKKKNSKK EIAAFPMLE |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [100-347] |
1 11 21 31 41 51 | | | | | | 1 MSDDENNASG KTQTGDDEDD VNEYFSTNNL EKTKHKKGSF PSFGLSKIVL NNIKRKGFRQ 60 61 PTPIQRKTIP LILQSRDIVG MARTGSGKTA AFILPMVEKL KSHSGKIGAR AVILSPSREL 120 121 AMQTFNVFKD FARGTELRSV LLTGGDSLEE QFGMMMTNPD VIIATPGRFL HLKVEMNLDL 180 181 KSVEYVVFDE ADRLFEMGFQ EQLNELLASL PTTRQTLLFS ATLPNSLVDF VKAGLVNPVL 240 241 VRLDAETK |
Detection Method: | ![]() |
Confidence: | 419.9794 |
Match: | 1hv8A |
Description: | Putative DEAD box RNA helicase |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [348-480] |
1 11 21 31 41 51 | | | | | | 1 VSENLEMLFL SSKNADREAN LLYILQEIIK IPLATSEQLQ KLQNSNNEAD SDSDDENDRQ 60 61 KKRRNFKKEK FRKQKMPAAN ELPSEKATIL FVPTRHHVEY ISQLLRDCGY LISYIYGTLD 120 121 QHARKRQLYN FRA |
Detection Method: | ![]() |
Confidence: | 419.9794 |
Match: | 1hv8A |
Description: | Putative DEAD box RNA helicase |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [481-577] |
1 11 21 31 41 51 | | | | | | 1 GLTSILVVTD VAARGVDIPM LANVINYTLP GSSKIFVHRV GRTARAGNKG WAYSIVAENE 60 61 LPYLLDLELF LGKKILLTPM YDSLVDVMKK RWIDEGK |
Region A: Residues: [578-665] |
1 11 21 31 41 51 | | | | | | 1 PEYQFQPPKL SYTKRLVLGS CPRLDVEGLG DLYKNLMSSN FDLQLAKKTA MKAEKLYYRT 60 61 RTSASPESLK RSKEIISSGW DAQNAFFG |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.858 | a.8.10 | Description not found. |
Region A: Residues: [666-899] |
1 11 21 31 41 51 | | | | | | 1 KNEEKEKLDF LAKLQNRRNK ETVFEFTRNP DDEMAVFMKR RRKQLAPIQR KATERRELLE 60 61 KERMAGLHIL SKMKFWKGDD VETGYTVSED ALKEFEDAHQ LLEAQENENK KKKKPKSFKD 120 121 PTFFLSHYAP AGDIQDKQLQ ITNGFANDAA QAAYDLNSDD KVQVHKQTAT VKWDKKRKKY 180 181 VNTQGIDNKK YIIGESGQKI AASFRSGRFD DWSKARNLKP LKVGSRETSI PSNL |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [900-995] |
1 11 21 31 41 51 | | | | | | 1 LEDPSQGPAA NGRTVRGKFK HKQMKAPKMP DKHRDNYYSQ KKKVEKALQS GISVKGYNNA 60 61 PGLRSELKST EQIRKDRIIA EKKRAKNARP SKKRKF |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.