| Protein: | RBK1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 333 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RBK1.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-72 | [1..333] | [1..333] |
|
|
2.0E-68 | [3..331] | [66..377] |
|
|
2.0E-64 | [3..331] | [28..340] |
|
|
4.0E-64 | [3..332] | [4..305] |
|
|
5.0E-64 | [2..331] | [4..301] |
|
Region A: Residues: [1-333] |
1 11 21 31 41 51
| | | | | |
1 MGITVIGSLN YDLDTFTDRL PNAGETFRAN HFETHAGGKG LNQAAAIGKL KNPSSRYSVR 60
61 MIGNVGNDTF GKQLKDTLSD CGVDITHVGT YEGINTGTAT ILIEEKAGGQ NRILIVEGAN 120
121 SKTIYDPKQL CEIFPEGKEE EEYVVFQHEI PDPLSIIKWI HANRPNFQIV YNPSPFKAMP 180
181 KKDWELVDLL VVNEIEGLQI VESVFDNELV EEIREKIKDD FLGEYRKICE LLYEKLMNRK 240
241 KRGIVVMTLG SRGVLFCSHE SPEVQFLPAI QNVSVVDTTG AGDTFLGGLV TQLYQGETLS 300
301 TAIKFSTLAS SLTIQRKGAA ESMPLYKDVQ KDA
|
| Detection Method: |  |
| Confidence: | 315.38764 |
| Match: | 1rk2A_ |
| Description: | Ribokinase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ribokinase activity | 4.13972810632318 | bayes_pls_golite062009 |
| carbohydrate kinase activity | 3.53872211951287 | bayes_pls_golite062009 |
| kinase activity | 2.44230326483029 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 2.43969902311075 | bayes_pls_golite062009 |
| transferase activity | 2.15883296431019 | bayes_pls_golite062009 |
| phosphofructokinase activity | 1.98381934960918 | bayes_pls_golite062009 |
| catalytic activity | 1.74474587246986 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.01768986812996 | bayes_pls_golite062009 |
| binding | 0.750579388499649 | bayes_pls_golite062009 |
| nucleic acid binding | 0.43271347210671 | bayes_pls_golite062009 |
| DNA binding | 0.0886731070705062 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0561488099067549 | bayes_pls_golite062009 |
