| Protein: | BPH1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 2167 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BPH1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [335..2167] | [1..1833] |
|
|
0.0 | [1278..2166] | [362..1266] |
|
|
0.0 | [1264..2167] | [1954..2849] |
|
|
0.0 | [1321..2166] | [2708..3568] |
|
Region A: Residues: [1-1252] |
1 11 21 31 41 51
| | | | | |
1 MNSIINAASK VLRLQDDVKK ATIILGDILI LQPINHEVEP DVENLVQHEL TKIIQGYPIQ 60
61 DNMIINSKKG TVEDDLCELN NYTCFALSKS FDLCHDSRNF NIAQPKRWIQ LLETLTDSVS 120
121 FAVIVQIILT LSNISLINKQ TLGKLKKLRI RIFEILSNKN DSWKSTLLQK NLIEWYIFML 180
181 SVDCTPLELQ NLYLHKELKF CNGILNSLTL QVSDPRSQNY LQFENTYKLF QIQKSSRINN 240
241 SFLFYIEFNS VTSNRIMTIE RHIYLEIKEG QFCISNDNYI IGLFENFEFE AGTLYFIGVL 300
301 IDHNNRITLY VDGSMINQLT LFENSICQLS TCELGSMICS IKVYRFYLWD GLLTEFAINI 360
361 LQAIGTNYQY TFSKKKEGPE VLSLCQDFLI AKAHLMARPT TEISSTKYID EIELLEMENI 420
421 IIDVNPNDIL QDFTESSNFT VKFEESTNSK NIPEVGKCYF YRSSNLVSKF VSIDSIRLAF 480
481 LNMTESGSID DLFHHVSHLM NLLRNIDILN WFKKDFGFPL FAYTLKQKIT QDLSQPLNIQ 540
541 FFNLFLEFCG WDFNDISKSI ILDTDAYENI VLNLDLWYMN EDQSSLASGG LEIIRFLFFQ 600
601 ISSLMEASIY SKFNSNKFND MNILEKLCLS YQAVTKRENQ NSKFNELSSD LISVFVTLLK 660
661 SNTDKRHLQW FLHLSYYFIK RKDVRSTEII LQAVDQLFSF YLDQGSDENA KILSEIIPLK 720
721 LILMIMDQIV ENNESNPITC LNILFKVVLT NKPLFKQFYK NDGLKLILTM LCKVGKSYRE 780
781 EIISLLLTYS IGNYTTANEI FSGAEDMIGG ISNDKITAKE IIYLAVNFIE WHVINSNASD 840
841 SSSVLDLNNH ILRFVEDLKS LSAVPINESV FDPKKSYVMV SLLDLSIALN ESEDISKFKS 900
901 SSKVISELIK GNIMCALTKY AAYDFEVYMS TFFCHSTEYK LVYPKTVMNN SSYLELSFIV 960
961 TLLPEILNDL VDSNNNLNLM MLKHPYTMSN LLYFLRKFRP DTSQIVMPKD FYFSSYTCLL1020
1021 HCVIQIDKSS FYHFKNVSKS QLLQDFKICI MNLIYSNTLK QIIWEKEEYE MFSESLMAHQ1080
1081 EVLFAHGACD NETVGLLLIF FANRLRDCGY NKAVFNCMKV IIKNKERKLK EVACFFDPAN1140
1141 KSEVLEGLSN ILSCNNSETM NLITEQYPFF FNNTQQVRFI NIVTNILFKN NNFSPISVRQ1200
1201 IKNQVYEWKN ARSEYVTQNN KKCLILFRKD NTSLDFKIKK SISRYTYNLK TD
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1253-1432] |
1 11 21 31 41 51
| | | | | |
1 REENAVFYRN NLNLLIFHLK HTLEIQSNPN SSCKWSSDFA EDFDGMKRRL LPAWEPKYEP 60
61 LINEEDANQD TITGGNRQRR ESGSILSYEF IEHMETLESE PVGDLNENRK ILRLLKDNDS 120
121 IATIWNCSLI IGLEIKEGIL IHGSNYLYFV SDYYFSLEDK KILKLSEVSQ ESRDMTVSLI 180
181
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1433-1522] |
1 11 21 31 41 51
| | | | | |
1 NGPDVKRVST FLKHEVFVWK LLDITFVTKR PFLLRDVAIE LLFKERVSAF FSFYNKRVRD 60
61 DVLRVLNKIP KHLPADPIFS SVLQEINDRG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1523-1803] |
1 11 21 31 41 51
| | | | | |
1 NSIVARNGIG KASIASKFTS VFSANNSLID GFEISKKWVR GEISNFYYLL SINILAGRSF 60
61 NDLTQYPVFP WVIADYESNV LDLENPKTYR DLSKPMGAQS EKRKLQFIER YEALASLENA 120
121 DSAPFHYGTH YSSAMIVSSY LIRLKPFVES FLLLQGGSFG PADRLFSSLE RAWSSASSEN 180
181 TTDVRELTPE FFFLPEFLIN VNSYDFGTDQ SGKKVDDVVL PPWANGDPKV FIQKNREALE 240
241 SPYVSAHLHE WIDLIFGYKQ KGDIAVKSVN VFNRLSYPGA V
|
| Detection Method: | |
| Confidence: | 177.853872 |
| Match: | PF02138 |
| Description: | Beige/BEACH domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1804-2167] |
1 11 21 31 41 51
| | | | | |
1 NLDNIDDENE RRAITGIIHN FGQTPLQIFQ EPHPEKIACN VQQLTTEVWR KVPMKPIFEK 60
61 TIFNLNEKNR SVDYVIHDPS YFDSLYWRGF AFPNLFFRTE ESLVSLRIVH KNWLKIGLDI 120
121 FKKTHMAQIT SFAYWKLGEF ITGDKNGLIK VWKYRKDKHS VSGNLENKKT MFGHLCELKE 180
181 MRCYHDYNTL LTLDISGLVY VWDMINFELV RQITNDAQKV AISQHAGSIM VLTKNNAISI 240
241 FNLNGQIYTS KKFEPAKIVS SIDFFDFTKL DAGYRKHIYW KEMEILLVGF EDGTIEIYEL 300
301 FLNFHNEWAI KLLKQLCTEK GKAITSIKGQ GKTYLSQKRR KDTAEPHEIE VIAGTLDGRL 360
361 AIWY
|
| Detection Method: | |
| Confidence: | 72.0 |
| Match: | 1gg2B_ |
| Description: | beta1-subunit of the signal-transducing G protein heterotrimer |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1279-1366] |
1 11 21 31 41 51
| | | | | |
1 SNPNSSCKWS SDFAEDFDGM KRRLLPAWEP KYEPLINEED ANQDTITGGN RQRRESGSIL 60
61 SYEFIEHMET LESEPVGDLN ENRKILRL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1367-1841] |
1 11 21 31 41 51
| | | | | |
1 LKDNDSIATI WNCSLIIGLE IKEGILIHGS NYLYFVSDYY FSLEDKKILK LSEVSQESRD 60
61 MTVSLINGPD VKRVSTFLKH EVFVWKLLDI TFVTKRPFLL RDVAIELLFK ERVSAFFSFY 120
121 NKRVRDDVLR VLNKIPKHLP ADPIFSSVLQ EINDRGNSIV ARNGIGKASI ASKFTSVFSA 180
181 NNSLIDGFEI SKKWVRGEIS NFYYLLSINI LAGRSFNDLT QYPVFPWVIA DYESNVLDLE 240
241 NPKTYRDLSK PMGAQSEKRK LQFIERYEAL ASLENADSAP FHYGTHYSSA MIVSSYLIRL 300
301 KPFVESFLLL QGGSFGPADR LFSSLERAWS SASSENTTDV RELTPEFFFL PEFLINVNSY 360
361 DFGTDQSGKK VDDVVLPPWA NGDPKVFIQK NREALESPYV SAHLHEWIDL IFGYKQKGDI 420
421 AVKSVNVFNR LSYPGAVNLD NIDDENERRA ITGIIHNFGQ TPLQIFQEPH PEKIA
|
| Detection Method: | |
| Confidence: | 167.0 |
| Match: | 1t77A |
| Description: | Crystal structure of the PH-BEACH domains of human LRBA/BGL |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1842-2167] |
1 11 21 31 41 51
| | | | | |
1 CNVQQLTTEV WRKVPMKPIF EKTIFNLNEK NRSVDYVIHD PSYFDSLYWR GFAFPNLFFR 60
61 TEESLVSLRI VHKNWLKIGL DIFKKTHMAQ ITSFAYWKLG EFITGDKNGL IKVWKYRKDK 120
121 HSVSGNLENK KTMFGHLCEL KEMRCYHDYN TLLTLDISGL VYVWDMINFE LVRQITNDAQ 180
181 KVAISQHAGS IMVLTKNNAI SIFNLNGQIY TSKKFEPAKI VSSIDFFDFT KLDAGYRKHI 240
241 YWKEMEILLV GFEDGTIEIY ELFLNFHNEW AIKLLKQLCT EKGKAITSIK GQGKTYLSQK 300
301 RRKDTAEPHE IEVIAGTLDG RLAIWY
|
| Detection Method: | |
| Confidence: | 71.30103 |
| Match: | 1p22A |
| Description: | F-box/WD-repeat protein 1 (beta-TRCP1) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.8484919978091 | bayes_pls_golite062009 |
| protein binding | 1.42618832381942 | bayes_pls_golite062009 |
| transporter activity | 0.482752505032799 | bayes_pls_golite062009 |
