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Protein Overview: gi|4587572, gi|2...

General Information:
Name(s) found: gi|4587572 [NCBI NR]
gi|25518001 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|4587572|gb|AAD25803.1|AC006550_11 Similar to gb|U70015 lysosomal trafficking regulator from Mus musculus and contains 2 PF|00400 WD40, G-beta repeats. ESTs gb|T43386 and gb|AA395236 come from this gene. [Arabidopsis thaliana] [NCBI NR]
  • pir||D86161 F10O3.12 protein - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 3600 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: multidimensional cell growth [IMP]
    signal transduction [ISS]
    vacuole organization [IMP]
    trichome morphogenesis [IMP]
    Molecular Function: binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKWATLLKDI KEKVGLAQSS DSDPFPVDLT APPSSSSSSS SPSFTYPSSS SLHHFNFSPS  60
   61 RDNHELELDF KRLWEEFRSS SSEKEKEAAL NLTVDIFCRL VKRHANVDQL VTMLVETHIF 120
  121 SFVIGRAFVT DIEKLKIGSK TRSLNVEKVL RFFSDVTKEG FSPGANLLTA VEVLVSGPID 180
  181 KQSLLDSGIF CCLIHVLIAL LAYDELSKSK ITGDLEVVSA EKDAGYIVLQ TRRLEVEGSV 240
  241 VHIMKALASN PSAAQSLIED DSLESLFNMV ANGSITVFSQ YKEGLVPLHN IQLHRHAMQI 300
  301 LGLLLVNDNG STARYIRKHH LIKVLLMAVK EFDPSCGDSA YTMGIVDLLL ECVELSYRPE 360
  361 AGGVRLREDI RNAHGYHFLV QFALVLSSLP KNPIFVSSNH DSGSDDPEVF HDGENTNSTE 420
  421 NADFSSQNFA PSLSRLLDVL VTLAQTGPAE PSVGRASRSS QTKPTGHSRS RTSSVDSIYD 480
  481 ETWEQGSGKV KDLEAVQMLQ DIFLKAENKD LQAEVLNRMF KIFSSHVENY RLCQELRTVP 540
  541 LLVLNMAGFP SSLQDIILKI LEYAVTVVNC VPEQELLSLC CLLQQPITSQ LKHTILSFFV 600
  601 KLISFDQQYK KVLREVGVLE VLQDDLKQHK LLIGPDQYSG VSSHSDRKPS SGSFRKNLDT 660
  661 KDAIISSPKL MESGSGKLPV FEVDNTITVG WDCLISLLKK AEANQSSFRA ANGVAIILPF 720
  721 LISDAHRSGV LRILSCLITE DTKQVHHDEL GAVVDLLKSG MVTGISGHQY KLHDDAKCDT 780
  781 MGALWRIVGV NGSAQRVFGE ATGFSLLLTT LHTFQGKREH MDESDLTVYI KLFKYLFRLM 840
  841 TAAVCENAVN RMKLHAVITS QTFFELLAES GLLCVELERQ VIQLLLELAL EVVVPPFLTS 900
  901 ESTALATIPE NENTTFVVTT PSGQFNPDKE RIYNAGAVRV LIRSLLLFSP KMQLEFLRLL 960
  961 ESLARASPFN QENLTSIGCV ELLLEIIYPF LAGSSPFLSY ALKIVEILGA YRLSPSELRM1020
 1021 LFRYVLQMRI MNSGHAIVGM MEKLILMEDT ALEHLSLAPF VELDMSKTGH ASVQVSLGER1080
 1081 SWPPAAGYSF VCWFQFRNFL TTQGKESEAS KAGGSSKTRM TSAQQHEQNI FRMFSVGAVS1140
 1141 NESPFYAELY FQEDGILTLA TSNSHSLSFS GLEIEEGRWH HLAVVHSKPN ALAGLFQASV1200
 1201 AYVYLDGKLR HTGKLGYSPS PVGKSLQVTV GTPATCARVS DLTWKTRSCY LFEEVLTSGC1260
 1261 IGFMYILGRG YKGLFQDADL LRFVPNQACG GGSMAILDSL DTDMTSSSNG QKFDGSNRQG1320
 1321 DSKADGSGIV WDLERLGNLA FQLPGKKLIF AFDGTCSEFI RASGNFSLLN LVDPLSAAAS1380
 1381 PIGGIPRFGR LVGNVSICRQ SVIGDTIRPV GGMTVVLALV EAAESRNMLH MALSLLACAL1440
 1441 HQNPQNVKDM QTIRGYHLLA LFLRPKMTLF DMQSLEIFFQ IAACEALFSE PKKLESVQSN1500
 1501 ITMPPTETIF ENSYEDLSLS RFRYDSSSVG SHGDMDDFSV PKDSFSHLSE LETDIPVETS1560
 1561 NCIVLSNADM VEHVLLDWTL WVTSPVSIQI ALLGFLENLV SMHWYRNHNL TILRRINLVE1620
 1621 HLLVTLQRGD VEVPVLEKLV VLLGCILEDG FLTSELENVV RFVIMTFNPP EVKSRSSLLR1680
 1681 ESMGKHVIVR NMLLEMLIDL QVTIKAEDLL ELWHKIVSSK LITYFLDEAV HPTSMRWIMT1740
 1741 LLGVCLASSP NFSLKFRTSG GYQGLLRVLQ NFYDSPDIYY ILFCLIFGKP VYPRLPEVRM1800
 1801 LDFHALVPND GSYVELKFIE LLDSVVAMAK STYDRLIMQS MLAHQSGNLS QVSASLVAEL1860
 1861 IEGAEMTGEL QGEALMHKTY AARLMGGEAS APAAATSVLR FMVDLAKMCP QFSTACRRAE1920
 1921 FVENCADLYF SCVRAAYAVK MAKQLSVKAE EKHINDADDS GSQGSLPHDQ DQSTKTSISV1980
 1981 GSFPQGQVSL GSEDMSLPAN YVVNDKMENI LPPPTQDTSK SLQGVEDVKK QDDHHVGPSA2040
 2041 SSERDFQDFT GNPVQVQATD SQSSASFPMI ESPLLSEKSS LKVSFTPSPS PVVALASWLG2100
 2101 SNYNESKSST LGSPSLESYV SVNEVDASSE RKSGSQGSSA ANAFFTVSPK LLLETDETGY2160
 2161 GGGPCSAGAS AVLDFMAEAL ADLVTEQIKA VPVLESILEM VPFYVDPESV LVFQGLCLSR2220
 2221 VMNYLERRLL RDDEEDEKKL DKAKWSVNLD AFCWMIVDRV YMGAFSQPAG VLRALEFLLS2280
 2281 MLQLANKDGR VEEVTPSGKG LLSLGRATRQ LDAYVHSILK NTNRMVLYCF LPSFLITIGE2340
 2341 EDLLSQLGLL VESKKRPSPN PATDESGIDI STVLQLLVAN RRIIFCPSNL DTDLNCCLCV2400
 2401 NLISLLLDQR KSVQNMSLDI VKYLLVHRRS ALEDLLVTKP NQGQNFDVLH GGFDKLLTGN2460
 2461 LPEFFKWLES SDKIINKVLE QCAAIMWVQY IAGSAKFPGV RIKGMEGRRK REMGRKSRDM2520
 2521 SKLDLKHWDQ LNERRYALEV LRDAMSTELR VVRQNKYGWI LHAESEWQTH LQQLVHERGI2580
 2581 FPMRKSKGTE DPEWQLCPIE GPYRMRKKLE RCKLKIDSIQ NVLDGKLELG EIELPKVKNE2640
 2641 DGPVISDTDS EPPFLLSELY DESFLKESDD FKDVASARNG WNDDRASSTN EASLHSALDF2700
 2701 GGKSSIASVP ITDTTHVKSE TGSPRHSSSA KMDETNGREE KSEKELNDDG EYLIRPYLEH2760
 2761 LEKIRFRYNC ERVVDLDKHD GIFLIGEFCL YVIENFYIDE DGCICEKECE DELSVIDQAL2820
 2821 GVKKDVSGSS DFHSKSSTSW TTTVKTGAVG GRAWAYGGGA WGKEKMCMTG NLPHPWRMWK2880
 2881 LNNVHEILKR DYQLRPVAIE IFSMDGCNDL LVFHKKEREE VFKNLVAMNL PRNSMLDTTI2940
 2941 SGSAKQESNE GGRLFKLMAK SFSKRWQNGE ISNFQYLMHL NTLAGRGYSD LTQYPVFPWV3000
 3001 LADYDSESLD FSDPKTFRKL HKPMGCQTPE GEEEFRKRYE SWDDPEVPKF HYGSHYSSAG3060
 3061 IVLFYLIRLP PFSSENQKLQ GGQFDHADRL FNSIKDTWLS AAGKGNTSDV KELIPEFFYM3120
 3121 PEFLENRFSL DLGEKQSGEK VGDVFLPPWA RGSVREFILK HREALESDYV SENLHHWIDL3180
 3181 IFGYKQRGKA AEEAVNVFYH YTYEGNVDID AVTDPAMKAS ILAQINHFGQ TPKQLFPKAH3240
 3241 VKRRTDRKIP LHPLKHSMHL VPHEIRKCSS SISQIITFHD KVLVAGANCF LKPRGYTKYI3300
 3301 TWGFPDRSLR FMSYDQDKLL STHENLHESN QIQCAGVSHD GRIVVTGAED GLVCVWRVSK3360
 3361 DGPRGSRRLR LEKALCAHTA KVTCLRVSQP YMMIASGSDD CTVIIWDLSS LSFVRQLPDF3420
 3421 PVPISAIYIN DLTGEIVTAA GTVLAVWSIN GDCLAVANTS QLPSDSVLSV TGSTSSDWLE3480
 3481 TSWYVTGHQS GAVKVWRMIH CTDPVSAESK TSSSNRTGGL NLGDQVPEYK LILHKVLKFH3540
 3541 KQPVTALHLT SDLKQLLSGD SAGQLLSWTV PDETLRASMK QASLKQASLK QASLKQASSV3600
 3601

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.82

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle