| Protein: | KCC4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1037 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KCC4.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..912] | [1..912] |
|
|
0.0 | [1..803] | [1..803] |
|
|
0.0 | [2..460] | [66..512] |
|
|
0.0 | [5..485] | [57..526] |
|
|
0.0 | [2..460] | [46..493] |
|
Region A: Residues: [1-111] |
1 11 21 31 41 51
| | | | | |
1 MTVANTETHS AAKPSSTIGP WKLGETLGFG STGKVQLAQH ERTGHRTAVK VISKSIFNNN 60
61 GNHSNDDSVL PYNIEREIVI MKLLSHPNVL SLYDVWETNN NLYLILEYAE K
|
|
Region B: Residues: [310-396] |
1 11 21 31 41 51
| | | | | |
1 LADSNNHTSA SIDDSILQNL VVLWHGRHAD DIVSKLKENG TNKEKILYAL LYRFKLDSVR 60
61 GSNKKNRNKI KKTKKNKRSS TLSSSSS
|
| Detection Method: |  |
| Confidence: | 557.9897 |
| Match: | 1a06__ |
| Description: | Calmodulin-dependent protein kinase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [112-309] |
1 11 21 31 41 51
| | | | | |
1 GELFNLLVDH GPLPEREAIN CFRQIIIGIS YCHALGIVHR DLKPENLLLD SFYNIKIADF 60
61 GMAALQTDAD LLETSCGSPH YAAPEIVSGL PYEGFASDVW SCGVILFALL TGRLPFDEEN 120
121 GNVRDLLLKV QKGQFEMPND TEISRDAQDL IGKILVVDPR QRIKIRDILS HPLLKKYQTI 180
181 KDSKSIKDLP RENTYLYP
|
| Detection Method: | |
| Confidence: | 557.9897 |
| Match: | 1a06__ |
| Description: | Calmodulin-dependent protein kinase |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [397-625] |
1 11 21 31 41 51
| | | | | |
1 LLLNNRSIQS TPRRRTSKRH SREFSSSRKR SSFLLSSNPT DSSPIPLRSS KRITHINVAS 60
61 ANTQATPSGV PNPHKRNSKK RSSKRLSYMP NTKRSSLTSK SLSNFTNLID DDDWEYIEKD 120
121 AKRTSSNFAT LIDEIFEPEK FELAKREKAE LQRKVQEAKR QSVNAQKINE DEFGSEVSDG 180
181 MKELKKINDK VSSPLINYEF SQQELLQDID TLLTNRYQLS SYTRPISRL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [626-918] |
1 11 21 31 41 51
| | | | | |
1 DPGLTPVTET LPNNLKEKTA LLQDTEKKII ETIRRSKFLG SLLNVRGGLS PGKSELAPIE 60
61 ESPIVSTTPL IYNDRMEPRR ISDVEVPHFT RKSKHFTTAN NRRSVLSLYA KDSIKDLNEF 120
121 LIKEDPDLPP QGSTDNESRS EDPEIAESIT DSRNIQYDED DSKDGDNVNN DNILSDFPQG 180
181 VGISQEYDMK DKNPNQSPIS KSAEPTLVVK LPSLSSFQGK NASGLGLYQR EPSKVTLPSL 240
241 TSNNSSVGEN IEDGAEKGTE SEKIAASLSD DDLKEDNDKK DNDTVNAPTT VKK
|
| Detection Method: | |
| Confidence: | 7.24 |
| Match: | 1iu4A |
| Description: | Microbial transglutaminase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [919-1037] |
1 11 21 31 41 51
| | | | | |
1 PPNSVLLKKF SKGKILELEI HAKIPEKRLY EGLHKLLEGW KQYGLKNLVF NITNMIITGK 60
61 LVNDSILFLR STLFEIMVLP NGDGRSLIKF NKKTGSTKTL TKLATEIQII LQKEGVLDK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.846 | 0.953 | axial cellular bud site selection | d.110.1 | Profilin (actin-binding protein) |
|
Region A: Residues: [921-1037] |
1 11 21 31 41 51
| | | | | |
1 NSVLLKKFSK GKILELEIHA KIPEKRLYEG LHKLLEGWKQ YGLKNLVFNI TNMIITGKLV 60
61 NDSILFLRST LFEIMVLPNG DGRSLIKFNK KTGSTKTLTK LATEIQIILQ KEGVLDK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.846 | d.110.1 | Profilin (actin-binding protein) |
