| Protein: | MAL33 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 468 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MAL33.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..468] | [1..470] |
|
|
0.0 | [1..468] | [1..470] |
|
Region A: Residues: [1-76] |
1 11 21 31 41 51
| | | | | |
1 MTLVKYACDY CRVRRVKCDG KKPCSRCIEH NFDCTYQQPL KKRGSKPIGT RSLKYIPKAK 60
61 MFIDNKSCTA AAEILM
|
| Detection Method: |  |
| Confidence: | 45.68867 |
| Match: | 1ajyA_ |
| Description: | PUT3 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.56444258780502 | bayes_pls_golite062009 |
| DNA binding | 4.26146437716972 | bayes_pls_golite062009 |
| nucleic acid binding | 4.17369933547911 | bayes_pls_golite062009 |
| transcription factor activity | 3.049435548132 | bayes_pls_golite062009 |
| binding | 2.91929847152301 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.03201524223606 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.87955444697212 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.86200506906385 | bayes_pls_golite062009 |
| transcription activator activity | 0.915626626047549 | bayes_pls_golite062009 |
|
Region A: Residues: [77-286] |
1 11 21 31 41 51
| | | | | |
1 KVPKKVIDQC LRLYHDNLYV IWPLLSYDDL HKLLDEEYND HYVYWFLVAL SAANLSDLQS 60
61 ELESEGGFSF TGKQLAVLCM SSRQQFDDLS GRDIFRIMTY YCLLRCFSQS SDVRNSYRLC 120
121 REAIGLVIVA GLHREKAYES LSFREQQLLR KVYYLLLLTE RYYSVYVHCV TSLDTTIAPP 180
181 QPEFVTDPRL SLDSFFEMIR VFTVPGKCFF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [287-468] |
1 11 21 31 41 51
| | | | | |
1 DALATESTSG SCTEDSLKKI WKELHTASLE IEPWSYGYVD ISFSRHWIRA LAWKLVFQMN 60
61 GTKFFSNANN AHILVEIAKD MLDDIFLTPN NLYDVHGPGI PMKSLEVANA LVDIVNKYDH 120
121 NMKLEAWNIL CDVSKFVFSL KHCNHKMFQR FSTKCQSALI DLPISRPLRL NDDSKDEDDI 180
181 IP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
