| Protein: | UBX7 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 436 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBX7.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..427] | [1..427] |
|
|
6.0E-57 | [78..424] | [150..465] |
|
|
3.0E-52 | [2..292] | [183..479] |
|
|
8.0E-45 | [5..295] | [163..464] |
|
|
4.0E-44 | [9..292] | [174..464] |
|
|
6.0E-41 | [2..293] | [147..489] |
|
Region A: Residues: [1-78] |
1 11 21 31 41 51
| | | | | |
1 MLEALFRDSV EEAINDSIKE GVVLAVYNTA RDDQWLKSWF KGDDVSLDTL AEHSIWLRLV 60
61 KDTEQFQLFE QVFPNVVV
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
| Term | Confidence | Notes |
| protein disulfide isomerase activity | 2.05206748531532 | bayes_pls_golite062009 |
| intramolecular oxidoreductase activity, transposing S-S bonds | 2.05206748531532 | bayes_pls_golite062009 |
| intramolecular oxidoreductase activity, interconverting keto- and enol-groups | 1.83987272812734 | bayes_pls_golite062009 |
| intramolecular oxidoreductase activity | 1.5535855642475 | bayes_pls_golite062009 |
| catalytic activity | 0.672192331361968 | bayes_pls_golite062009 |
| binding | 0.665189138843282 | bayes_pls_golite062009 |
| protein binding | 0.157273259994554 | bayes_pls_golite062009 |
| hydrolase activity | 0.150237022038507 | bayes_pls_golite062009 |
| transcription regulator activity | 0.13699526678272 | bayes_pls_golite062009 |
|
Region A: Residues: [79-194] |
1 11 21 31 41 51
| | | | | |
1 PSIYLIRAGK IELIIQGEDD RHWEKLLACI GIKDKKAGES SSRETNPGLA REEKSSRDVH 60
61 RKNARERIAE TTLEIQRREQ LKQRKLAEEE RERIIRLVRA DRAERKALDE THHRTL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.710 | 0.031 | endoplasmic reticulum | a.25.1 | Ferritin-like |
| View | Download | 0.516 | 0.004 | endoplasmic reticulum | a.47.2 | t-snare proteins |
| View | Download | 0.567 | 0.004 | endoplasmic reticulum | d.67.3 | Ribosome recycling factor, RRF |
| View | Download | 0.554 | 0.002 | endoplasmic reticulum | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.492 | 0.001 | endoplasmic reticulum | a.46.1 | Methionine synthase domain |
| View | Download | 0.474 | N/A | N/A | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.472 | N/A | N/A | f.31.1 | Photosystem I reaction center subunit XI, PsaL |
| View | Download | 0.457 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.451 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.450 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.436 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.427 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.420 | N/A | N/A | f.31.1 | Photosystem I reaction center subunit XI, PsaL |
| View | Download | 0.411 | N/A | N/A | f.18.1 | F1F0 ATP synthase subunit A |
| View | Download | 0.411 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.410 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.394 | N/A | N/A | d.67.3 | Ribosome recycling factor, RRF |
| View | Download | 0.381 | N/A | N/A | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.376 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.372 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.370 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.369 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.368 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.365 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.361 | N/A | N/A | a.24.1 | Apolipoprotein |
| View | Download | 0.361 | N/A | N/A | a.24.1 | Apolipoprotein |
| View | Download | 0.361 | N/A | N/A | a.24.1 | Apolipoprotein |
| View | Download | 0.351 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.345 | N/A | N/A | d.15.1 | Ubiquitin-like |
| View | Download | 0.344 | N/A | N/A | d.67.3 | Ribosome recycling factor, RRF |
| View | Download | 0.342 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.338 | N/A | N/A | f.17.2 | Cytochrome c oxidase subunit II-like, transmembrane region |
| View | Download | 0.329 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.327 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.322 | N/A | N/A | d.129.4 | Cell-division protein ZipA, C-terminal domain |
| View | Download | 0.321 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.314 | N/A | N/A | a.63.1 | Apolipophorin-III |
| View | Download | 0.314 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.305 | N/A | N/A | a.130.1 | Chorismate mutase II |
| View | Download | 0.304 | N/A | N/A | d.67.3 | Ribosome recycling factor, RRF |
| View | Download | 0.303 | N/A | N/A | f.31.1 | Photosystem I reaction center subunit XI, PsaL |
| View | Download | 0.301 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.297 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.295 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.284 | N/A | N/A | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.275 | N/A | N/A | b.84.2 | Rudiment single hybrid motif |
| View | Download | 0.274 | N/A | N/A | d.80.1 | Tautomerase/MIF |
| View | Download | 0.269 | N/A | N/A | a.2.6 | Effector domain of the protein kinase pkn/prk1 |
| View | Download | 0.267 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.265 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.264 | N/A | N/A | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.264 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.262 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.260 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.259 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.258 | N/A | N/A | d.67.3 | Ribosome recycling factor, RRF |
| View | Download | 0.257 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.257 | N/A | N/A | a.63.1 | Apolipophorin-III |
| View | Download | 0.254 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.254 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.249 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.247 | N/A | N/A | d.79.2 | Tubulin/Dihydroxyacetone kinase C-terminal domain |
| View | Download | 0.245 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.243 | N/A | N/A | d.56.1 | GroEL-intermediate domain like |
| View | Download | 0.243 | N/A | N/A | d.15.4 | 2Fe-2S ferredoxin-like |
| View | Download | 0.243 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.243 | N/A | N/A | a.7.8 | GAT domain |
| View | Download | 0.242 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.241 | N/A | N/A | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| View | Download | 0.241 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.239 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.238 | N/A | N/A | a.7.8 | GAT domain |
| View | Download | 0.238 | N/A | N/A | d.79.2 | Tubulin/Dihydroxyacetone kinase C-terminal domain |
| View | Download | 0.238 | N/A | N/A | a.24.1 | Apolipoprotein |
| View | Download | 0.234 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.234 | N/A | N/A | d.67.3 | Ribosome recycling factor, RRF |
| View | Download | 0.223 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.218 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.218 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.218 | N/A | N/A | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.217 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.215 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.214 | N/A | N/A | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| View | Download | 0.213 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.212 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.211 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.211 | N/A | N/A | a.25.2 | Thermoplasma ferritin-like 4-helical bundle |
| View | Download | 0.211 | N/A | N/A | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.209 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.208 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.208 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.207 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.204 | N/A | N/A | d.80.1 | Tautomerase/MIF |
| View | Download | 0.202 | N/A | N/A | c.14.1 | ClpP/crotonase |
| View | Download | 0.202 | N/A | N/A | a.29.2 | Bromodomain |
|
Region A: Residues: [195-323] |
1 11 21 31 41 51
| | | | | |
1 DDDKPLDVHD YIKDAQKLHS SKCVLQIRMT DGKTLKHEFN SSETLNDVRK WVDVNRTDGD 60
61 CPYSFHRGIP RVTFKDSDEL KTLETLELTP RSALLLKPLE TQNSGLSVTG MEGPSLLGRL 120
121 YKGFSTWWH
|
| Detection Method: | |
| Confidence: | 17.154902 |
| Match: | 1jruA_ |
| Description: | p47 |
Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [324-436] |
1 11 21 31 41 51
| | | | | |
1 NDKDPEVTSQ REETSKPNRH EVRSSTPLSG AASSSCFQYN NVREPVQSSA HASPMLTPSG 60
61 TRYPSETNLT TSRSVSPNVF QFVNNDHQED PEDPTTFNGN NVHLEKKKDE DKK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.354 | a.39.1 | EF-hand |
| View | Download | 0.244 | a.4.1 | Homeodomain-like |
| View | Download | 0.296 | a.77.1 | DEATH domain |
| View | Download | 0.268 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.354 | a.39.1 | EF-hand |
| View | Download | 0.268 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.244 | a.4.1 | Homeodomain-like |
| View | Download | 0.232 | b.125.1 | Lipoprotein localization factors LolAB |
| View | Download | 0.232 | b.125.1 | Lipoprotein localization factors LolAB |
