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View Structure Prediction Details

Protein: YBR141C
Organism: Saccharomyces cerevisiae
Length: 337 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YBR141C.

Description E-value Query
Range
Subject
Range
YBR141C - Putative S-adenosylmethionine-dependent methyltransferase; green fluorescent protein (GFP)-fusion pr...
0.0 [1..337] [1..337]
SPAC630.10 - conserved fungal protein
BMT2_SCHPO - 25S rRNA adenine-N(1) methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SP...
5.0E-90 [136..335] [61..266]

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Predicted Domain #1
Region A:
Residues: [1-86]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSRKSKSIT GKRKQVGSNV TRVIKPQKTR RIIRRFHHLI NKRQSICKFL CLKENLDDSN  60
   61 EEKNDKIIRL SIKGNVRLGK YYEDGK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted functions:

Term Confidence Notes
transcription factor activity 3.18366984273735 bayes_pls_golite062009
methyltransferase activity 3.10667683620555 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 3.03092170856472 bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity 2.91374296950366 bayes_pls_golite062009
RNA methyltransferase activity 2.63941856307703 bayes_pls_golite062009
rRNA methyltransferase activity 2.14987271695676 bayes_pls_golite062009
transferase activity 1.97261773840408 bayes_pls_golite062009
sequence-specific DNA binding 1.67826024217505 bayes_pls_golite062009
transcription repressor activity 1.3964019208723 bayes_pls_golite062009
tRNA methyltransferase activity 1.38914410921124 bayes_pls_golite062009
catalytic activity 1.16970557486814 bayes_pls_golite062009
N-methyltransferase activity 1.13958114124635 bayes_pls_golite062009
RNA polymerase II transcription factor activity 1.01831614309793 bayes_pls_golite062009
transcription regulator activity 0.953292160159369 bayes_pls_golite062009
DNA binding 0.878229880745235 bayes_pls_golite062009
nucleic acid binding 0.861417215599224 bayes_pls_golite062009
rRNA (guanine) methyltransferase activity 0.596425215866866 bayes_pls_golite062009
protein methyltransferase activity 0.537387676293877 bayes_pls_golite062009
binding 0.486361285495359 bayes_pls_golite062009
rRNA (adenine) methyltransferase activity 0.374941249737739 bayes_pls_golite062009
rRNA (adenine-N6,N6-)-dimethyltransferase activity 0.300104233454652 bayes_pls_golite062009
rRNA (uridine) methyltransferase activity 0.129311242793576 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [87-337]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SQSFNDAMES QLLRLHSLIK NESKSKDTSD LAVMYTLLGY IMNQINKLGG LETYQIASQN  60
   61 GQLKERGGDT SKLLEKWIRS SFENCPGAVA LEIGSLSSGN RISRCALFRN VVRIDLEEHE 120
  121 GVIKQDFMER PLPRNENDKF DLISCSLVLN FVKNHRDRGA MCHRMVKFLK PQGYIFIVLP 180
  181 QACVTHSRYC DKTLLQNLLG SIGLIMLNSH QSNKLYYCLY QLQVVSPQPS SFSKRIKVND 240
  241 GPGLNNFGIT L

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle